Protein–RNA interactions for Protein: P04626

ERBB2, Receptor tyrosine-protein kinase erbB-2, humanhuman

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2P04626 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
ERBB2P04626 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ERBB2P04626 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.02■□□□□ 0.48
ERBB2P04626 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ERBB2P04626 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
ERBB2P04626 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
ERBB2P04626 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.02■□□□□ 0.48
ERBB2P04626 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
ERBB2P04626 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ERBB2P04626 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ERBB2P04626 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ERBB2P04626 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ERBB2P04626 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
ERBB2P04626 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
ERBB2P04626 TPM4P1-201ENST00000436100 807 ntBASIC18.02■□□□□ 0.48
ERBB2P04626 AC009078.2-202ENST00000463353 338 ntBASIC18.02■□□□□ 0.48
ERBB2P04626 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.48
ERBB2P04626 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.02■□□□□ 0.48
ERBB2P04626 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.02■□□□□ 0.48
ERBB2P04626 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.02■□□□□ 0.48
ERBB2P04626 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ERBB2P04626 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.02■□□□□ 0.48
ERBB2P04626 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.02■□□□□ 0.48
ERBB2P04626 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ERBB2P04626 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
ERBB2P04626 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
ERBB2P04626 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
ERBB2P04626 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
ERBB2P04626 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.47
ERBB2P04626 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
ERBB2P04626 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ERBB2P04626 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ERBB2P04626 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ERBB2P04626 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
ERBB2P04626 AP002414.3-201ENST00000589352 1468 ntBASIC18.01■□□□□ 0.47
ERBB2P04626 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ERBB2P04626 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
ERBB2P04626 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
ERBB2P04626 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.01■□□□□ 0.47
ERBB2P04626 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ERBB2P04626 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.01■□□□□ 0.47
ERBB2P04626 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ERBB2P04626 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ERBB2P04626 AC106886.4-201ENST00000623557 2502 ntBASIC18.01■□□□□ 0.47
ERBB2P04626 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ERBB2P04626 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
ERBB2P04626 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
ERBB2P04626 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ERBB2P04626 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
ERBB2P04626 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.01■□□□□ 0.47
ERBB2P04626 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.01■□□□□ 0.47
ERBB2P04626 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ERBB2P04626 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.01■□□□□ 0.47
ERBB2P04626 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.01■□□□□ 0.47
ERBB2P04626 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.01■□□□□ 0.47
ERBB2P04626 SLC25A6P4-201ENST00000586535 553 ntBASIC18.01■□□□□ 0.47
ERBB2P04626 TERC-201ENST00000602385 541 ntBASIC18.01■□□□□ 0.47
ERBB2P04626 MIR7706-201ENST00000613747 67 ntBASIC18.01■□□□□ 0.47
ERBB2P04626 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ERBB2P04626 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ERBB2P04626 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.01■□□□□ 0.47
ERBB2P04626 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ERBB2P04626 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.01■□□□□ 0.47
ERBB2P04626 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ERBB2P04626 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ERBB2P04626 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
ERBB2P04626 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
ERBB2P04626 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.01■□□□□ 0.47
ERBB2P04626 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18■□□□□ 0.47
ERBB2P04626 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ERBB2P04626 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
ERBB2P04626 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18■□□□□ 0.47
ERBB2P04626 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18■□□□□ 0.47
ERBB2P04626 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
ERBB2P04626 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18■□□□□ 0.47
ERBB2P04626 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
ERBB2P04626 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18■□□□□ 0.47
ERBB2P04626 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ERBB2P04626 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ERBB2P04626 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18■□□□□ 0.47
ERBB2P04626 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18■□□□□ 0.47
ERBB2P04626 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ERBB2P04626 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18■□□□□ 0.47
ERBB2P04626 RNA5SP419-201ENST00000515908 135 ntBASIC18■□□□□ 0.47
ERBB2P04626 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18■□□□□ 0.47
ERBB2P04626 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18■□□□□ 0.47
ERBB2P04626 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18■□□□□ 0.47
ERBB2P04626 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18■□□□□ 0.47
ERBB2P04626 AL773604.1-201ENST00000617417 272 ntBASIC18■□□□□ 0.47
ERBB2P04626 AL805961.1-202ENST00000641562 540 ntBASIC18■□□□□ 0.47
ERBB2P04626 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ERBB2P04626 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18■□□□□ 0.47
ERBB2P04626 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
ERBB2P04626 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ERBB2P04626 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18■□□□□ 0.47
ERBB2P04626 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ERBB2P04626 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ERBB2P04626 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18■□□□□ 0.47
ERBB2P04626 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18■□□□□ 0.47
ERBB2P04626 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms