Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP4B1Q9Y6B7 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
AP4B1Q9Y6B7 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP4B1Q9Y6B7 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
AP4B1Q9Y6B7 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP4B1Q9Y6B7 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
AP4B1Q9Y6B7 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.56■□□□□ 0.24
AP4B1Q9Y6B7 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.56■□□□□ 0.24
AP4B1Q9Y6B7 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.56■□□□□ 0.24
AP4B1Q9Y6B7 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.56■□□□□ 0.24
AP4B1Q9Y6B7 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.56■□□□□ 0.24
AP4B1Q9Y6B7 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
AP4B1Q9Y6B7 FAM86EP-206ENST00000510506 987 ntBASIC16.56■□□□□ 0.24
AP4B1Q9Y6B7 VENTXP5-201ENST00000523979 775 ntBASIC16.56■□□□□ 0.24
AP4B1Q9Y6B7 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.56■□□□□ 0.24
AP4B1Q9Y6B7 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.56■□□□□ 0.24
AP4B1Q9Y6B7 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.56■□□□□ 0.24
AP4B1Q9Y6B7 AC091076.1-201ENST00000610741 619 ntBASIC16.56■□□□□ 0.24
AP4B1Q9Y6B7 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.56■□□□□ 0.24
AP4B1Q9Y6B7 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP4B1Q9Y6B7 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.56■□□□□ 0.24
AP4B1Q9Y6B7 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP4B1Q9Y6B7 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.56■□□□□ 0.24
AP4B1Q9Y6B7 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
AP4B1Q9Y6B7 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP4B1Q9Y6B7 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
AP4B1Q9Y6B7 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP4B1Q9Y6B7 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP4B1Q9Y6B7 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
AP4B1Q9Y6B7 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP4B1Q9Y6B7 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP4B1Q9Y6B7 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP4B1Q9Y6B7 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP4B1Q9Y6B7 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.55■□□□□ 0.24
AP4B1Q9Y6B7 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP4B1Q9Y6B7 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
AP4B1Q9Y6B7 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
AP4B1Q9Y6B7 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.55■□□□□ 0.24
AP4B1Q9Y6B7 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.55■□□□□ 0.24
AP4B1Q9Y6B7 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP4B1Q9Y6B7 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP4B1Q9Y6B7 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.55■□□□□ 0.24
AP4B1Q9Y6B7 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP4B1Q9Y6B7 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP4B1Q9Y6B7 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP4B1Q9Y6B7 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
AP4B1Q9Y6B7 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP4B1Q9Y6B7 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP4B1Q9Y6B7 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP4B1Q9Y6B7 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP4B1Q9Y6B7 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP4B1Q9Y6B7 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP4B1Q9Y6B7 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP4B1Q9Y6B7 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
AP4B1Q9Y6B7 PAUPAR-201ENST00000630360 2965 ntBASIC16.55■□□□□ 0.24
AP4B1Q9Y6B7 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP4B1Q9Y6B7 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.55■□□□□ 0.24
AP4B1Q9Y6B7 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
AP4B1Q9Y6B7 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.55■□□□□ 0.24
AP4B1Q9Y6B7 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.55■□□□□ 0.24
AP4B1Q9Y6B7 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.55■□□□□ 0.24
AP4B1Q9Y6B7 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP4B1Q9Y6B7 AC008687.5-201ENST00000593746 558 ntBASIC16.55■□□□□ 0.24
AP4B1Q9Y6B7 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.55■□□□□ 0.24
AP4B1Q9Y6B7 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP4B1Q9Y6B7 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
AP4B1Q9Y6B7 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP4B1Q9Y6B7 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP4B1Q9Y6B7 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP4B1Q9Y6B7 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.55■□□□□ 0.24
AP4B1Q9Y6B7 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP4B1Q9Y6B7 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.55■□□□□ 0.24
AP4B1Q9Y6B7 REXO1L11P-201ENST00000620964 1927 ntBASIC16.55■□□□□ 0.24
AP4B1Q9Y6B7 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP4B1Q9Y6B7 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP4B1Q9Y6B7 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
AP4B1Q9Y6B7 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.54■□□□□ 0.24
AP4B1Q9Y6B7 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP4B1Q9Y6B7 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP4B1Q9Y6B7 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP4B1Q9Y6B7 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.54■□□□□ 0.24
AP4B1Q9Y6B7 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP4B1Q9Y6B7 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
AP4B1Q9Y6B7 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP4B1Q9Y6B7 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.54■□□□□ 0.24
AP4B1Q9Y6B7 RNF216P1-203ENST00000404404 2427 ntBASIC16.54■□□□□ 0.24
AP4B1Q9Y6B7 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP4B1Q9Y6B7 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP4B1Q9Y6B7 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
AP4B1Q9Y6B7 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
AP4B1Q9Y6B7 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
AP4B1Q9Y6B7 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.54■□□□□ 0.24
AP4B1Q9Y6B7 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.54■□□□□ 0.24
AP4B1Q9Y6B7 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.54■□□□□ 0.24
AP4B1Q9Y6B7 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP4B1Q9Y6B7 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP4B1Q9Y6B7 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
AP4B1Q9Y6B7 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
AP4B1Q9Y6B7 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP4B1Q9Y6B7 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms