Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
TUBA1CQ9BQE3 AC233702.3-201ENST00000578656 1387 ntBASIC16.27■□□□□ 0.2
TUBA1CQ9BQE3 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.27■□□□□ 0.2
TUBA1CQ9BQE3 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TUBA1CQ9BQE3 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
TUBA1CQ9BQE3 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.27■□□□□ 0.2
TUBA1CQ9BQE3 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TUBA1CQ9BQE3 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
TUBA1CQ9BQE3 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TUBA1CQ9BQE3 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TUBA1CQ9BQE3 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.27■□□□□ 0.2
TUBA1CQ9BQE3 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.27■□□□□ 0.2
TUBA1CQ9BQE3 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TUBA1CQ9BQE3 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
TUBA1CQ9BQE3 OR6D1P-203ENST00000641209 4860 ntBASIC16.27■□□□□ 0.2
TUBA1CQ9BQE3 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TUBA1CQ9BQE3 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.27■□□□□ 0.2
TUBA1CQ9BQE3 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
TUBA1CQ9BQE3 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.27■□□□□ 0.2
TUBA1CQ9BQE3 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.27■□□□□ 0.2
TUBA1CQ9BQE3 AC012615.1-201ENST00000565797 1299 ntBASIC16.27■□□□□ 0.2
TUBA1CQ9BQE3 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.27■□□□□ 0.2
TUBA1CQ9BQE3 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.27■□□□□ 0.2
TUBA1CQ9BQE3 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
TUBA1CQ9BQE3 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.27■□□□□ 0.2
TUBA1CQ9BQE3 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.27■□□□□ 0.2
TUBA1CQ9BQE3 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.27■□□□□ 0.2
TUBA1CQ9BQE3 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.27■□□□□ 0.2
TUBA1CQ9BQE3 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
TUBA1CQ9BQE3 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.27■□□□□ 0.2
TUBA1CQ9BQE3 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.27■□□□□ 0.2
TUBA1CQ9BQE3 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
TUBA1CQ9BQE3 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
TUBA1CQ9BQE3 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TUBA1CQ9BQE3 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.27■□□□□ 0.19
TUBA1CQ9BQE3 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
TUBA1CQ9BQE3 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TUBA1CQ9BQE3 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TUBA1CQ9BQE3 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TUBA1CQ9BQE3 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
TUBA1CQ9BQE3 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TUBA1CQ9BQE3 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TUBA1CQ9BQE3 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
TUBA1CQ9BQE3 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TUBA1CQ9BQE3 LINC00167-201ENST00000530583 1419 ntBASIC16.27■□□□□ 0.19
TUBA1CQ9BQE3 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TUBA1CQ9BQE3 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
TUBA1CQ9BQE3 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
TUBA1CQ9BQE3 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
TUBA1CQ9BQE3 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TUBA1CQ9BQE3 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.27■□□□□ 0.19
TUBA1CQ9BQE3 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.26■□□□□ 0.19
TUBA1CQ9BQE3 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
TUBA1CQ9BQE3 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TUBA1CQ9BQE3 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TUBA1CQ9BQE3 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.26■□□□□ 0.19
TUBA1CQ9BQE3 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TUBA1CQ9BQE3 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TUBA1CQ9BQE3 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.26■□□□□ 0.19
TUBA1CQ9BQE3 LINC00554-201ENST00000564841 3011 ntBASIC16.26■□□□□ 0.19
TUBA1CQ9BQE3 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TUBA1CQ9BQE3 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TUBA1CQ9BQE3 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.26■□□□□ 0.19
TUBA1CQ9BQE3 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TUBA1CQ9BQE3 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.26■□□□□ 0.19
TUBA1CQ9BQE3 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TUBA1CQ9BQE3 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TUBA1CQ9BQE3 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
TUBA1CQ9BQE3 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.26■□□□□ 0.19
TUBA1CQ9BQE3 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.26■□□□□ 0.19
TUBA1CQ9BQE3 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.26■□□□□ 0.19
TUBA1CQ9BQE3 NUS1P1-201ENST00000446295 882 ntBASIC16.26■□□□□ 0.19
TUBA1CQ9BQE3 AC104819.1-201ENST00000504587 486 ntBASIC16.26■□□□□ 0.19
TUBA1CQ9BQE3 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TUBA1CQ9BQE3 AC074051.2-201ENST00000565115 352 ntBASIC16.26■□□□□ 0.19
TUBA1CQ9BQE3 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TUBA1CQ9BQE3 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TUBA1CQ9BQE3 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.26■□□□□ 0.19
TUBA1CQ9BQE3 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.26■□□□□ 0.19
TUBA1CQ9BQE3 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TUBA1CQ9BQE3 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TUBA1CQ9BQE3 CROCCP1-201ENST00000426910 5675 ntBASIC16.26■□□□□ 0.19
TUBA1CQ9BQE3 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TUBA1CQ9BQE3 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
TUBA1CQ9BQE3 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.26■□□□□ 0.19
TUBA1CQ9BQE3 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TUBA1CQ9BQE3 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TUBA1CQ9BQE3 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TUBA1CQ9BQE3 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.26■□□□□ 0.19
TUBA1CQ9BQE3 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TUBA1CQ9BQE3 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.26■□□□□ 0.19
TUBA1CQ9BQE3 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TUBA1CQ9BQE3 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.26■□□□□ 0.19
TUBA1CQ9BQE3 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TUBA1CQ9BQE3 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TUBA1CQ9BQE3 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TUBA1CQ9BQE3 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.25■□□□□ 0.19
TUBA1CQ9BQE3 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TUBA1CQ9BQE3 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TUBA1CQ9BQE3 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms