Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
SMIM11BQ8TCY0 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
SMIM11BQ8TCY0 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC11.21□□□□□ -0.62
SMIM11BQ8TCY0 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC11.21□□□□□ -0.62
SMIM11BQ8TCY0 AC007326.2-201ENST00000624224 7579 ntBASIC11.21□□□□□ -0.62
SMIM11BQ8TCY0 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
SMIM11BQ8TCY0 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
SMIM11BQ8TCY0 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
SMIM11BQ8TCY0 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
SMIM11BQ8TCY0 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
SMIM11BQ8TCY0 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
SMIM11BQ8TCY0 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
SMIM11BQ8TCY0 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC11.21□□□□□ -0.62
SMIM11BQ8TCY0 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
SMIM11BQ8TCY0 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
SMIM11BQ8TCY0 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
SMIM11BQ8TCY0 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
SMIM11BQ8TCY0 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
SMIM11BQ8TCY0 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
SMIM11BQ8TCY0 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SMIM11BQ8TCY0 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
SMIM11BQ8TCY0 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
SMIM11BQ8TCY0 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SMIM11BQ8TCY0 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC11.2□□□□□ -0.62
SMIM11BQ8TCY0 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SMIM11BQ8TCY0 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
SMIM11BQ8TCY0 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC11.2□□□□□ -0.62
SMIM11BQ8TCY0 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SMIM11BQ8TCY0 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SMIM11BQ8TCY0 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SMIM11BQ8TCY0 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SMIM11BQ8TCY0 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
SMIM11BQ8TCY0 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC11.2□□□□□ -0.62
SMIM11BQ8TCY0 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
SMIM11BQ8TCY0 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC11.2□□□□□ -0.62
SMIM11BQ8TCY0 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SMIM11BQ8TCY0 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
SMIM11BQ8TCY0 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SMIM11BQ8TCY0 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
SMIM11BQ8TCY0 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC11.2□□□□□ -0.62
SMIM11BQ8TCY0 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC11.2□□□□□ -0.62
SMIM11BQ8TCY0 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SMIM11BQ8TCY0 KRT17P3-201ENST00000420566 1262 ntBASIC11.2□□□□□ -0.62
SMIM11BQ8TCY0 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC11.2□□□□□ -0.62
SMIM11BQ8TCY0 GUSBP6-202ENST00000438529 1198 ntBASIC11.2□□□□□ -0.62
SMIM11BQ8TCY0 B3GAT3P1-201ENST00000471720 806 ntBASIC11.2□□□□□ -0.62
SMIM11BQ8TCY0 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC11.2□□□□□ -0.62
SMIM11BQ8TCY0 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
SMIM11BQ8TCY0 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC11.2□□□□□ -0.62
SMIM11BQ8TCY0 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC11.2□□□□□ -0.62
SMIM11BQ8TCY0 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC11.2□□□□□ -0.62
SMIM11BQ8TCY0 AC069544.1-201ENST00000609399 999 ntBASIC11.2□□□□□ -0.62
SMIM11BQ8TCY0 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SMIM11BQ8TCY0 FES-204ENST00000414248 2327 ntTSL 2 BASIC11.2□□□□□ -0.62
SMIM11BQ8TCY0 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC11.2□□□□□ -0.62
SMIM11BQ8TCY0 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC11.2□□□□□ -0.62
SMIM11BQ8TCY0 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SMIM11BQ8TCY0 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC11.2□□□□□ -0.62
SMIM11BQ8TCY0 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC11.2□□□□□ -0.62
SMIM11BQ8TCY0 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
SMIM11BQ8TCY0 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SMIM11BQ8TCY0 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SMIM11BQ8TCY0 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SMIM11BQ8TCY0 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
SMIM11BQ8TCY0 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SMIM11BQ8TCY0 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC11.19□□□□□ -0.62
SMIM11BQ8TCY0 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
SMIM11BQ8TCY0 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SMIM11BQ8TCY0 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SMIM11BQ8TCY0 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC11.19□□□□□ -0.62
SMIM11BQ8TCY0 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SMIM11BQ8TCY0 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC11.19□□□□□ -0.62
SMIM11BQ8TCY0 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SMIM11BQ8TCY0 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SMIM11BQ8TCY0 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
SMIM11BQ8TCY0 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
SMIM11BQ8TCY0 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SMIM11BQ8TCY0 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SMIM11BQ8TCY0 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
SMIM11BQ8TCY0 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
SMIM11BQ8TCY0 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
SMIM11BQ8TCY0 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SMIM11BQ8TCY0 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SMIM11BQ8TCY0 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SMIM11BQ8TCY0 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
SMIM11BQ8TCY0 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SMIM11BQ8TCY0 TSPY6P-201ENST00000448518 926 ntBASIC11.19□□□□□ -0.62
SMIM11BQ8TCY0 AC006970.2-201ENST00000450065 779 ntBASIC11.19□□□□□ -0.62
SMIM11BQ8TCY0 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC11.19□□□□□ -0.62
SMIM11BQ8TCY0 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC11.19□□□□□ -0.62
SMIM11BQ8TCY0 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC11.19□□□□□ -0.62
SMIM11BQ8TCY0 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
SMIM11BQ8TCY0 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC11.19□□□□□ -0.62
SMIM11BQ8TCY0 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
SMIM11BQ8TCY0 LINC02228-204ENST00000642115 2962 ntBASIC11.19□□□□□ -0.62
SMIM11BQ8TCY0 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC11.19□□□□□ -0.62
SMIM11BQ8TCY0 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC11.19□□□□□ -0.62
SMIM11BQ8TCY0 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SMIM11BQ8TCY0 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SMIM11BQ8TCY0 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms