Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RFWD2Q8NHY2 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFWD2Q8NHY2 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.04■□□□□ 0.32
RFWD2Q8NHY2 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.04■□□□□ 0.32
RFWD2Q8NHY2 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.04■□□□□ 0.32
RFWD2Q8NHY2 MYB-241ENST00000616088 3573 ntTSL 5 BASIC17.04■□□□□ 0.32
RFWD2Q8NHY2 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RFWD2Q8NHY2 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFWD2Q8NHY2 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC17.04■□□□□ 0.32
RFWD2Q8NHY2 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RFWD2Q8NHY2 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
RFWD2Q8NHY2 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
RFWD2Q8NHY2 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC17.03■□□□□ 0.32
RFWD2Q8NHY2 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
RFWD2Q8NHY2 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RFWD2Q8NHY2 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
RFWD2Q8NHY2 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFWD2Q8NHY2 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.03■□□□□ 0.32
RFWD2Q8NHY2 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFWD2Q8NHY2 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFWD2Q8NHY2 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFWD2Q8NHY2 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.03■□□□□ 0.32
RFWD2Q8NHY2 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RFWD2Q8NHY2 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFWD2Q8NHY2 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RFWD2Q8NHY2 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RFWD2Q8NHY2 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
RFWD2Q8NHY2 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
RFWD2Q8NHY2 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RFWD2Q8NHY2 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFWD2Q8NHY2 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.03■□□□□ 0.32
RFWD2Q8NHY2 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.03■□□□□ 0.32
RFWD2Q8NHY2 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFWD2Q8NHY2 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.03■□□□□ 0.32
RFWD2Q8NHY2 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.03■□□□□ 0.32
RFWD2Q8NHY2 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFWD2Q8NHY2 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.03■□□□□ 0.32
RFWD2Q8NHY2 AC124947.2-201ENST00000547118 1133 ntBASIC17.03■□□□□ 0.32
RFWD2Q8NHY2 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.03■□□□□ 0.32
RFWD2Q8NHY2 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
RFWD2Q8NHY2 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RFWD2Q8NHY2 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.03■□□□□ 0.32
RFWD2Q8NHY2 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RFWD2Q8NHY2 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFWD2Q8NHY2 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.03■□□□□ 0.32
RFWD2Q8NHY2 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
RFWD2Q8NHY2 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.03■□□□□ 0.32
RFWD2Q8NHY2 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RFWD2Q8NHY2 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
RFWD2Q8NHY2 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
RFWD2Q8NHY2 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFWD2Q8NHY2 AL513477.1-201ENST00000602865 2407 ntBASIC17.02■□□□□ 0.32
RFWD2Q8NHY2 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFWD2Q8NHY2 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.02■□□□□ 0.32
RFWD2Q8NHY2 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFWD2Q8NHY2 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFWD2Q8NHY2 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.02■□□□□ 0.32
RFWD2Q8NHY2 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFWD2Q8NHY2 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.02■□□□□ 0.32
RFWD2Q8NHY2 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFWD2Q8NHY2 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.02■□□□□ 0.32
RFWD2Q8NHY2 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.02■□□□□ 0.32
RFWD2Q8NHY2 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFWD2Q8NHY2 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.02■□□□□ 0.32
RFWD2Q8NHY2 AC087499.1-201ENST00000418141 1075 ntBASIC17.02■□□□□ 0.32
RFWD2Q8NHY2 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.02■□□□□ 0.32
RFWD2Q8NHY2 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.02■□□□□ 0.32
RFWD2Q8NHY2 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.02■□□□□ 0.32
RFWD2Q8NHY2 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFWD2Q8NHY2 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RFWD2Q8NHY2 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.02■□□□□ 0.32
RFWD2Q8NHY2 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.31
RFWD2Q8NHY2 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RFWD2Q8NHY2 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.02■□□□□ 0.31
RFWD2Q8NHY2 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.02■□□□□ 0.31
RFWD2Q8NHY2 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
RFWD2Q8NHY2 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
RFWD2Q8NHY2 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
RFWD2Q8NHY2 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RFWD2Q8NHY2 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.02■□□□□ 0.31
RFWD2Q8NHY2 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.02■□□□□ 0.31
RFWD2Q8NHY2 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.01■□□□□ 0.31
RFWD2Q8NHY2 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
RFWD2Q8NHY2 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFWD2Q8NHY2 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFWD2Q8NHY2 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.01■□□□□ 0.31
RFWD2Q8NHY2 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFWD2Q8NHY2 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFWD2Q8NHY2 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFWD2Q8NHY2 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFWD2Q8NHY2 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFWD2Q8NHY2 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFWD2Q8NHY2 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
RFWD2Q8NHY2 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFWD2Q8NHY2 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFWD2Q8NHY2 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFWD2Q8NHY2 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFWD2Q8NHY2 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFWD2Q8NHY2 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFWD2Q8NHY2 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms