Protein–RNA interactions for Protein: Q8N271

PROM2, Prominin-2, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM2Q8N271 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PROM2Q8N271 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PROM2Q8N271 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC21.66■■□□□ 1.06
PROM2Q8N271 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PROM2Q8N271 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC21.66■■□□□ 1.06
PROM2Q8N271 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PROM2Q8N271 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PROM2Q8N271 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC21.66■■□□□ 1.06
PROM2Q8N271 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC21.66■■□□□ 1.06
PROM2Q8N271 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC21.66■■□□□ 1.06
PROM2Q8N271 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC21.66■■□□□ 1.06
PROM2Q8N271 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PROM2Q8N271 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PROM2Q8N271 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
PROM2Q8N271 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PROM2Q8N271 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC21.66■■□□□ 1.06
PROM2Q8N271 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PROM2Q8N271 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
PROM2Q8N271 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PROM2Q8N271 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PROM2Q8N271 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PROM2Q8N271 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PROM2Q8N271 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
PROM2Q8N271 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PROM2Q8N271 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC21.65■■□□□ 1.06
PROM2Q8N271 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
PROM2Q8N271 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC21.65■■□□□ 1.06
PROM2Q8N271 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PROM2Q8N271 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PROM2Q8N271 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
PROM2Q8N271 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC21.65■■□□□ 1.06
PROM2Q8N271 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC21.65■■□□□ 1.06
PROM2Q8N271 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC21.65■■□□□ 1.06
PROM2Q8N271 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC21.65■■□□□ 1.06
PROM2Q8N271 MIR3909-201ENST00000579518 119 ntBASIC21.65■■□□□ 1.06
PROM2Q8N271 MIR4538-201ENST00000581377 78 ntBASIC21.65■■□□□ 1.06
PROM2Q8N271 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC21.65■■□□□ 1.06
PROM2Q8N271 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC21.65■■□□□ 1.06
PROM2Q8N271 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PROM2Q8N271 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PROM2Q8N271 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC21.65■■□□□ 1.06
PROM2Q8N271 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PROM2Q8N271 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC21.65■■□□□ 1.06
PROM2Q8N271 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PROM2Q8N271 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
PROM2Q8N271 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PROM2Q8N271 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PROM2Q8N271 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
PROM2Q8N271 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PROM2Q8N271 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC21.64■■□□□ 1.06
PROM2Q8N271 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC21.64■■□□□ 1.06
PROM2Q8N271 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PROM2Q8N271 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
PROM2Q8N271 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PROM2Q8N271 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
PROM2Q8N271 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC21.64■■□□□ 1.06
PROM2Q8N271 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC21.64■■□□□ 1.06
PROM2Q8N271 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PROM2Q8N271 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PROM2Q8N271 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC21.64■■□□□ 1.05
PROM2Q8N271 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
PROM2Q8N271 RN7SL837P-201ENST00000463010 287 ntBASIC21.64■■□□□ 1.05
PROM2Q8N271 AC135586.1-201ENST00000539323 574 ntBASIC21.64■■□□□ 1.05
PROM2Q8N271 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC21.64■■□□□ 1.05
PROM2Q8N271 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC21.64■■□□□ 1.05
PROM2Q8N271 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PROM2Q8N271 AC073389.1-201ENST00000595595 795 ntBASIC21.64■■□□□ 1.05
PROM2Q8N271 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
PROM2Q8N271 AL139327.4-201ENST00000612362 153 ntBASIC21.64■■□□□ 1.05
PROM2Q8N271 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PROM2Q8N271 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.64■■□□□ 1.05
PROM2Q8N271 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PROM2Q8N271 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PROM2Q8N271 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PROM2Q8N271 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
PROM2Q8N271 AL391825.1-201ENST00000457671 1364 ntBASIC21.63■■□□□ 1.05
PROM2Q8N271 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PROM2Q8N271 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PROM2Q8N271 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PROM2Q8N271 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21.63■■□□□ 1.05
PROM2Q8N271 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PROM2Q8N271 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC21.63■■□□□ 1.05
PROM2Q8N271 LINC01090-202ENST00000434418 560 ntTSL 5 BASIC21.63■■□□□ 1.05
PROM2Q8N271 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC21.63■■□□□ 1.05
PROM2Q8N271 AC011495.1-201ENST00000498085 584 ntBASIC21.63■■□□□ 1.05
PROM2Q8N271 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC21.63■■□□□ 1.05
PROM2Q8N271 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC21.63■■□□□ 1.05
PROM2Q8N271 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC21.63■■□□□ 1.05
PROM2Q8N271 ADAM3B-201ENST00000569937 840 ntBASIC21.63■■□□□ 1.05
PROM2Q8N271 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC21.63■■□□□ 1.05
PROM2Q8N271 WT1-AS_2.1-201ENST00000613208 137 ntBASIC21.63■■□□□ 1.05
PROM2Q8N271 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC21.63■■□□□ 1.05
PROM2Q8N271 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC21.63■■□□□ 1.05
PROM2Q8N271 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PROM2Q8N271 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC21.63■■□□□ 1.05
PROM2Q8N271 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PROM2Q8N271 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PROM2Q8N271 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PROM2Q8N271 AL023806.1-201ENST00000603994 1649 ntBASIC21.62■■□□□ 1.05
PROM2Q8N271 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms