Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC71Q8IV32 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC71Q8IV32 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC71Q8IV32 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC71Q8IV32 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.15■□□□□ 0.18
CCDC71Q8IV32 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC71Q8IV32 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC71Q8IV32 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.15■□□□□ 0.18
CCDC71Q8IV32 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.15■□□□□ 0.18
CCDC71Q8IV32 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.15■□□□□ 0.18
CCDC71Q8IV32 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.15■□□□□ 0.18
CCDC71Q8IV32 BNIP3P18-201ENST00000593976 575 ntBASIC16.15■□□□□ 0.18
CCDC71Q8IV32 AL591684.3-201ENST00000605187 298 ntBASIC16.15■□□□□ 0.18
CCDC71Q8IV32 AC023511.2-201ENST00000618803 211 ntBASIC16.15■□□□□ 0.18
CCDC71Q8IV32 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CCDC71Q8IV32 TP73-AS1-207ENST00000624167 988 ntBASIC16.15■□□□□ 0.18
CCDC71Q8IV32 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC71Q8IV32 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC71Q8IV32 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC71Q8IV32 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC71Q8IV32 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC71Q8IV32 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC71Q8IV32 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.18
CCDC71Q8IV32 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.14■□□□□ 0.18
CCDC71Q8IV32 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
CCDC71Q8IV32 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
CCDC71Q8IV32 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
CCDC71Q8IV32 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC71Q8IV32 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.14■□□□□ 0.17
CCDC71Q8IV32 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC71Q8IV32 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC71Q8IV32 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC71Q8IV32 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.14■□□□□ 0.17
CCDC71Q8IV32 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
CCDC71Q8IV32 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC71Q8IV32 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CCDC71Q8IV32 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC71Q8IV32 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC71Q8IV32 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC71Q8IV32 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
CCDC71Q8IV32 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.14■□□□□ 0.17
CCDC71Q8IV32 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CCDC71Q8IV32 AL590627.1-203ENST00000421194 1026 ntBASIC16.14■□□□□ 0.17
CCDC71Q8IV32 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC71Q8IV32 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC71Q8IV32 AC096582.2-201ENST00000510860 516 ntBASIC16.14■□□□□ 0.17
CCDC71Q8IV32 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
CCDC71Q8IV32 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.14■□□□□ 0.17
CCDC71Q8IV32 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC71Q8IV32 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.14■□□□□ 0.17
CCDC71Q8IV32 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CCDC71Q8IV32 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC71Q8IV32 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
CCDC71Q8IV32 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.14■□□□□ 0.17
CCDC71Q8IV32 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
CCDC71Q8IV32 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.14■□□□□ 0.17
CCDC71Q8IV32 AC046185.3-201ENST00000623228 1824 ntBASIC16.14■□□□□ 0.17
CCDC71Q8IV32 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC71Q8IV32 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC71Q8IV32 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.14■□□□□ 0.17
CCDC71Q8IV32 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
CCDC71Q8IV32 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.14■□□□□ 0.17
CCDC71Q8IV32 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC71Q8IV32 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.14■□□□□ 0.17
CCDC71Q8IV32 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC71Q8IV32 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC71Q8IV32 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC71Q8IV32 LYSMD4-203ENST00000378904 2122 ntBASIC16.13■□□□□ 0.17
CCDC71Q8IV32 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC71Q8IV32 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
CCDC71Q8IV32 AC008741.2-201ENST00000612792 3115 ntBASIC16.13■□□□□ 0.17
CCDC71Q8IV32 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC71Q8IV32 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC71Q8IV32 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC71Q8IV32 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC71Q8IV32 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.13■□□□□ 0.17
CCDC71Q8IV32 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC71Q8IV32 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
CCDC71Q8IV32 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC71Q8IV32 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.13■□□□□ 0.17
CCDC71Q8IV32 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.13■□□□□ 0.17
CCDC71Q8IV32 POM121L3P-201ENST00000419331 1163 ntBASIC16.13■□□□□ 0.17
CCDC71Q8IV32 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC71Q8IV32 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.13■□□□□ 0.17
CCDC71Q8IV32 MIR5100-201ENST00000579544 119 ntBASIC16.13■□□□□ 0.17
CCDC71Q8IV32 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.13■□□□□ 0.17
CCDC71Q8IV32 GPALPP1-207ENST00000611650 899 ntBASIC16.13■□□□□ 0.17
CCDC71Q8IV32 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.13■□□□□ 0.17
CCDC71Q8IV32 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
CCDC71Q8IV32 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CCDC71Q8IV32 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.13■□□□□ 0.17
CCDC71Q8IV32 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC71Q8IV32 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC71Q8IV32 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.13■□□□□ 0.17
CCDC71Q8IV32 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.13■□□□□ 0.17
CCDC71Q8IV32 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.13■□□□□ 0.17
CCDC71Q8IV32 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC71Q8IV32 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC71Q8IV32 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC71Q8IV32 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms