Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 AC109462.3-201ENST00000573934 613 ntBASIC11.79□□□□□ -0.52
LINC00242Q5T6M2 NAA38-203ENST00000575071 553 ntTSL 2 BASIC11.79□□□□□ -0.52
LINC00242Q5T6M2 AC019129.2-201ENST00000609837 1235 ntBASIC11.79□□□□□ -0.52
LINC00242Q5T6M2 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC11.79□□□□□ -0.52
LINC00242Q5T6M2 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC11.79□□□□□ -0.52
LINC00242Q5T6M2 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00242Q5T6M2 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00242Q5T6M2 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
LINC00242Q5T6M2 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00242Q5T6M2 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00242Q5T6M2 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00242Q5T6M2 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00242Q5T6M2 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
LINC00242Q5T6M2 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
LINC00242Q5T6M2 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
LINC00242Q5T6M2 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00242Q5T6M2 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC11.79□□□□□ -0.52
LINC00242Q5T6M2 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
LINC00242Q5T6M2 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00242Q5T6M2 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
LINC00242Q5T6M2 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00242Q5T6M2 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
LINC00242Q5T6M2 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00242Q5T6M2 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00242Q5T6M2 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00242Q5T6M2 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
LINC00242Q5T6M2 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC11.78□□□□□ -0.52
LINC00242Q5T6M2 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
LINC00242Q5T6M2 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00242Q5T6M2 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00242Q5T6M2 PGR-209ENST00000617858 2816 ntTSL 5 BASIC11.78□□□□□ -0.52
LINC00242Q5T6M2 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00242Q5T6M2 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
LINC00242Q5T6M2 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00242Q5T6M2 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00242Q5T6M2 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00242Q5T6M2 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00242Q5T6M2 STK24-203ENST00000397517 4578 ntTSL 2 BASIC11.78□□□□□ -0.52
LINC00242Q5T6M2 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00242Q5T6M2 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC11.78□□□□□ -0.52
LINC00242Q5T6M2 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00242Q5T6M2 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00242Q5T6M2 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00242Q5T6M2 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00242Q5T6M2 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC11.78□□□□□ -0.52
LINC00242Q5T6M2 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00242Q5T6M2 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
LINC00242Q5T6M2 ENSA-206ENST00000361631 725 ntTSL 2 BASIC11.78□□□□□ -0.52
LINC00242Q5T6M2 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC11.78□□□□□ -0.52
LINC00242Q5T6M2 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00242Q5T6M2 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00242Q5T6M2 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC11.78□□□□□ -0.52
LINC00242Q5T6M2 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00242Q5T6M2 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
LINC00242Q5T6M2 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC11.78□□□□□ -0.52
LINC00242Q5T6M2 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC11.78□□□□□ -0.52
LINC00242Q5T6M2 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00242Q5T6M2 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00242Q5T6M2 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00242Q5T6M2 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC11.78□□□□□ -0.52
LINC00242Q5T6M2 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC11.78□□□□□ -0.52
LINC00242Q5T6M2 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC11.78□□□□□ -0.52
LINC00242Q5T6M2 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC11.78□□□□□ -0.52
LINC00242Q5T6M2 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC11.78□□□□□ -0.52
LINC00242Q5T6M2 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00242Q5T6M2 AC140113.3-201ENST00000605663 199 ntBASIC11.78□□□□□ -0.52
LINC00242Q5T6M2 AL023973.1-201ENST00000624619 620 ntBASIC11.78□□□□□ -0.52
LINC00242Q5T6M2 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC11.78□□□□□ -0.52
LINC00242Q5T6M2 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC11.78□□□□□ -0.52
LINC00242Q5T6M2 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00242Q5T6M2 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00242Q5T6M2 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC11.78□□□□□ -0.52
LINC00242Q5T6M2 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC11.78□□□□□ -0.52
LINC00242Q5T6M2 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00242Q5T6M2 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC11.78□□□□□ -0.52
LINC00242Q5T6M2 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00242Q5T6M2 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00242Q5T6M2 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00242Q5T6M2 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
LINC00242Q5T6M2 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00242Q5T6M2 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00242Q5T6M2 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00242Q5T6M2 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00242Q5T6M2 AC022188.1-201ENST00000620960 1664 ntBASIC11.78□□□□□ -0.52
LINC00242Q5T6M2 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00242Q5T6M2 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00242Q5T6M2 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC11.78□□□□□ -0.52
LINC00242Q5T6M2 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC11.77□□□□□ -0.52
LINC00242Q5T6M2 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
LINC00242Q5T6M2 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
LINC00242Q5T6M2 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
LINC00242Q5T6M2 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
LINC00242Q5T6M2 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
LINC00242Q5T6M2 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC11.77□□□□□ -0.52
LINC00242Q5T6M2 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
LINC00242Q5T6M2 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
LINC00242Q5T6M2 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC11.77□□□□□ -0.52
LINC00242Q5T6M2 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
LINC00242Q5T6M2 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.52
LINC00242Q5T6M2 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms