Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
SSBP1Q04837 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
SSBP1Q04837 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SSBP1Q04837 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.56□□□□□ -0.08
SSBP1Q04837 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.56□□□□□ -0.08
SSBP1Q04837 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.56□□□□□ -0.08
SSBP1Q04837 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SSBP1Q04837 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SSBP1Q04837 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SSBP1Q04837 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC14.56□□□□□ -0.08
SSBP1Q04837 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SSBP1Q04837 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.56□□□□□ -0.08
SSBP1Q04837 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
SSBP1Q04837 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SSBP1Q04837 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.55□□□□□ -0.08
SSBP1Q04837 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
SSBP1Q04837 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
SSBP1Q04837 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSBP1Q04837 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.55□□□□□ -0.08
SSBP1Q04837 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSBP1Q04837 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SSBP1Q04837 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
SSBP1Q04837 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSBP1Q04837 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.55□□□□□ -0.08
SSBP1Q04837 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
SSBP1Q04837 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SSBP1Q04837 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSBP1Q04837 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.55□□□□□ -0.08
SSBP1Q04837 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSBP1Q04837 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSBP1Q04837 AL645728.1-201ENST00000366221 2101 ntBASIC14.55□□□□□ -0.08
SSBP1Q04837 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.55□□□□□ -0.08
SSBP1Q04837 AC012618.2-201ENST00000428058 849 ntBASIC14.55□□□□□ -0.08
SSBP1Q04837 AC034232.1-201ENST00000506026 1064 ntBASIC14.55□□□□□ -0.08
SSBP1Q04837 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC14.55□□□□□ -0.08
SSBP1Q04837 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC14.55□□□□□ -0.08
SSBP1Q04837 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC14.55□□□□□ -0.08
SSBP1Q04837 AC019129.2-201ENST00000609837 1235 ntBASIC14.55□□□□□ -0.08
SSBP1Q04837 AC113410.3-201ENST00000623366 203 ntBASIC14.55□□□□□ -0.08
SSBP1Q04837 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSBP1Q04837 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.55□□□□□ -0.08
SSBP1Q04837 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSBP1Q04837 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.55□□□□□ -0.08
SSBP1Q04837 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSBP1Q04837 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSBP1Q04837 AC005052.1-201ENST00000625181 2492 ntBASIC14.55□□□□□ -0.08
SSBP1Q04837 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SSBP1Q04837 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSBP1Q04837 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
SSBP1Q04837 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
SSBP1Q04837 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.55□□□□□ -0.08
SSBP1Q04837 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.55□□□□□ -0.08
SSBP1Q04837 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SSBP1Q04837 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SSBP1Q04837 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSBP1Q04837 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
SSBP1Q04837 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
SSBP1Q04837 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SSBP1Q04837 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
SSBP1Q04837 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SSBP1Q04837 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SSBP1Q04837 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
SSBP1Q04837 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.54□□□□□ -0.08
SSBP1Q04837 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.54□□□□□ -0.08
SSBP1Q04837 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SSBP1Q04837 AC092384.3-202ENST00000564646 2873 ntBASIC14.54□□□□□ -0.08
SSBP1Q04837 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.54□□□□□ -0.08
SSBP1Q04837 TSPY14P-201ENST00000303979 915 ntBASIC14.54□□□□□ -0.08
SSBP1Q04837 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SSBP1Q04837 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
SSBP1Q04837 KRT18P48-201ENST00000434763 852 ntBASIC14.54□□□□□ -0.08
SSBP1Q04837 PPOX-214ENST00000535223 664 ntTSL 3 BASIC14.54□□□□□ -0.08
SSBP1Q04837 FITM1-202ENST00000559294 800 ntBASIC14.54□□□□□ -0.08
SSBP1Q04837 IRX5-204ENST00000560154 879 ntTSL 5 BASIC14.54□□□□□ -0.08
SSBP1Q04837 AC026471.5-201ENST00000615068 467 ntBASIC14.54□□□□□ -0.08
SSBP1Q04837 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC14.54□□□□□ -0.08
SSBP1Q04837 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SSBP1Q04837 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SSBP1Q04837 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SSBP1Q04837 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC14.54□□□□□ -0.08
SSBP1Q04837 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SSBP1Q04837 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SSBP1Q04837 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SSBP1Q04837 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
SSBP1Q04837 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
SSBP1Q04837 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.54□□□□□ -0.08
SSBP1Q04837 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SSBP1Q04837 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SSBP1Q04837 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SSBP1Q04837 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.54□□□□□ -0.08
SSBP1Q04837 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SSBP1Q04837 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SSBP1Q04837 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SSBP1Q04837 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SSBP1Q04837 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
SSBP1Q04837 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
SSBP1Q04837 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
SSBP1Q04837 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SSBP1Q04837 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SSBP1Q04837 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms