Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
ATP1B3P54709 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ATP1B3P54709 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
ATP1B3P54709 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
ATP1B3P54709 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ATP1B3P54709 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ATP1B3P54709 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC14.96□□□□□ -0.01
ATP1B3P54709 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ATP1B3P54709 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ATP1B3P54709 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC14.96□□□□□ -0.01
ATP1B3P54709 AC103564.2-201ENST00000432853 1299 ntBASIC14.96□□□□□ -0.01
ATP1B3P54709 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ATP1B3P54709 AC125634.1-201ENST00000438758 1403 ntBASIC14.96□□□□□ -0.01
ATP1B3P54709 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC14.96□□□□□ -0.01
ATP1B3P54709 AC122714.2-201ENST00000502787 707 ntBASIC14.96□□□□□ -0.01
ATP1B3P54709 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC14.96□□□□□ -0.01
ATP1B3P54709 CD320-202ENST00000537716 1119 ntTSL 2 BASIC14.96□□□□□ -0.01
ATP1B3P54709 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC14.96□□□□□ -0.01
ATP1B3P54709 AC011498.5-201ENST00000592027 486 ntBASIC14.96□□□□□ -0.01
ATP1B3P54709 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
ATP1B3P54709 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC14.96□□□□□ -0.01
ATP1B3P54709 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC14.96□□□□□ -0.01
ATP1B3P54709 CA12-203ENST00000422263 2556 ntTSL 2 BASIC14.96□□□□□ -0.01
ATP1B3P54709 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ATP1B3P54709 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
ATP1B3P54709 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC14.96□□□□□ -0.02
ATP1B3P54709 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC14.96□□□□□ -0.02
ATP1B3P54709 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
ATP1B3P54709 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
ATP1B3P54709 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ATP1B3P54709 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ATP1B3P54709 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC14.95□□□□□ -0.02
ATP1B3P54709 PCDHA1-201ENST00000378133 2726 ntBASIC14.95□□□□□ -0.02
ATP1B3P54709 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ATP1B3P54709 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
ATP1B3P54709 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
ATP1B3P54709 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
ATP1B3P54709 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ATP1B3P54709 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ATP1B3P54709 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
ATP1B3P54709 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
ATP1B3P54709 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ATP1B3P54709 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
ATP1B3P54709 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
ATP1B3P54709 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ATP1B3P54709 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ATP1B3P54709 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.95□□□□□ -0.02
ATP1B3P54709 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
ATP1B3P54709 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ATP1B3P54709 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ATP1B3P54709 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ATP1B3P54709 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ATP1B3P54709 TMPOP1-202ENST00000424642 1267 ntBASIC14.95□□□□□ -0.02
ATP1B3P54709 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ATP1B3P54709 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ATP1B3P54709 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC14.95□□□□□ -0.02
ATP1B3P54709 AL136038.3-201ENST00000561909 1096 ntBASIC14.95□□□□□ -0.02
ATP1B3P54709 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC14.95□□□□□ -0.02
ATP1B3P54709 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
ATP1B3P54709 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC14.95□□□□□ -0.02
ATP1B3P54709 NDUFV2-AS1-203ENST00000608008 779 ntBASIC14.95□□□□□ -0.02
ATP1B3P54709 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC14.95□□□□□ -0.02
ATP1B3P54709 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
ATP1B3P54709 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
ATP1B3P54709 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.95□□□□□ -0.02
ATP1B3P54709 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ATP1B3P54709 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ATP1B3P54709 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
ATP1B3P54709 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ATP1B3P54709 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ATP1B3P54709 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ATP1B3P54709 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.95□□□□□ -0.02
ATP1B3P54709 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
ATP1B3P54709 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
ATP1B3P54709 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ATP1B3P54709 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
ATP1B3P54709 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ATP1B3P54709 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ATP1B3P54709 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
ATP1B3P54709 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC14.95□□□□□ -0.02
ATP1B3P54709 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
ATP1B3P54709 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ATP1B3P54709 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
ATP1B3P54709 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC14.94□□□□□ -0.02
ATP1B3P54709 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ATP1B3P54709 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ATP1B3P54709 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
ATP1B3P54709 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ATP1B3P54709 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.94□□□□□ -0.02
ATP1B3P54709 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ATP1B3P54709 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
ATP1B3P54709 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.94□□□□□ -0.02
ATP1B3P54709 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.94□□□□□ -0.02
ATP1B3P54709 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ATP1B3P54709 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
ATP1B3P54709 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ATP1B3P54709 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ATP1B3P54709 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
ATP1B3P54709 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ATP1B3P54709 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms