Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC13.12□□□□□ -0.31
TCRAP04437 USP36-216ENST00000589424 970 ntTSL 5 BASIC13.12□□□□□ -0.31
TCRAP04437 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TCRAP04437 AC079602.3-201ENST00000623931 403 ntBASIC13.12□□□□□ -0.31
TCRAP04437 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TCRAP04437 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TCRAP04437 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TCRAP04437 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TCRAP04437 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
TCRAP04437 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TCRAP04437 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
TCRAP04437 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TCRAP04437 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
TCRAP04437 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TCRAP04437 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TCRAP04437 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
TCRAP04437 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC13.12□□□□□ -0.31
TCRAP04437 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC13.12□□□□□ -0.31
TCRAP04437 AC011270.2-201ENST00000624293 2550 ntBASIC13.12□□□□□ -0.31
TCRAP04437 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TCRAP04437 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TCRAP04437 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TCRAP04437 AC097374.2-201ENST00000618617 1306 ntBASIC13.12□□□□□ -0.31
TCRAP04437 PGR-209ENST00000617858 2816 ntTSL 5 BASIC13.12□□□□□ -0.31
TCRAP04437 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TCRAP04437 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC13.12□□□□□ -0.31
TCRAP04437 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
TCRAP04437 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC13.11□□□□□ -0.31
TCRAP04437 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TCRAP04437 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TCRAP04437 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TCRAP04437 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC13.11□□□□□ -0.31
TCRAP04437 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TCRAP04437 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TCRAP04437 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TCRAP04437 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TCRAP04437 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC13.11□□□□□ -0.31
TCRAP04437 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC13.11□□□□□ -0.31
TCRAP04437 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
TCRAP04437 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TCRAP04437 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
TCRAP04437 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TCRAP04437 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TCRAP04437 ACE-204ENST00000428043 5120 ntTSL 2 BASIC13.11□□□□□ -0.31
TCRAP04437 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TCRAP04437 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
TCRAP04437 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC13.11□□□□□ -0.31
TCRAP04437 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC13.11□□□□□ -0.31
TCRAP04437 PON3-205ENST00000451904 1053 ntTSL 3 BASIC13.11□□□□□ -0.31
TCRAP04437 AC068472.1-201ENST00000474589 881 ntBASIC13.11□□□□□ -0.31
TCRAP04437 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC13.11□□□□□ -0.31
TCRAP04437 AL355075.4-201ENST00000554988 638 ntBASIC13.11□□□□□ -0.31
TCRAP04437 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
TCRAP04437 SNX21-213ENST00000614929 587 ntTSL 5 BASIC13.11□□□□□ -0.31
TCRAP04437 AC010947.1-201ENST00000623454 693 ntBASIC13.11□□□□□ -0.31
TCRAP04437 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TCRAP04437 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TCRAP04437 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC13.11□□□□□ -0.31
TCRAP04437 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TCRAP04437 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TCRAP04437 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC13.11□□□□□ -0.31
TCRAP04437 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TCRAP04437 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TCRAP04437 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TCRAP04437 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TCRAP04437 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TCRAP04437 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC13.11□□□□□ -0.31
TCRAP04437 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC13.11□□□□□ -0.31
TCRAP04437 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC13.11□□□□□ -0.31
TCRAP04437 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC13.11□□□□□ -0.31
TCRAP04437 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
TCRAP04437 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TCRAP04437 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
TCRAP04437 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
TCRAP04437 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC13.11□□□□□ -0.31
TCRAP04437 AC010460.3-201ENST00000511359 1579 ntBASIC13.11□□□□□ -0.31
TCRAP04437 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TCRAP04437 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TCRAP04437 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC13.11□□□□□ -0.31
TCRAP04437 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
TCRAP04437 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TCRAP04437 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC13.11□□□□□ -0.31
TCRAP04437 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TCRAP04437 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC13.11□□□□□ -0.31
TCRAP04437 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TCRAP04437 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TCRAP04437 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC13.1□□□□□ -0.31
TCRAP04437 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TCRAP04437 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
TCRAP04437 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TCRAP04437 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TCRAP04437 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
TCRAP04437 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TCRAP04437 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
TCRAP04437 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC13.1□□□□□ -0.31
TCRAP04437 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TCRAP04437 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TCRAP04437 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
TCRAP04437 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TCRAP04437 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms