Protein–RNA interactions for Protein: Q08554

DSC1, Desmocollin-1, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DSC1Q08554 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DSC1Q08554 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
DSC1Q08554 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
DSC1Q08554 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.16■□□□□ 0.5
DSC1Q08554 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC18.16■□□□□ 0.5
DSC1Q08554 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC18.16■□□□□ 0.5
DSC1Q08554 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC18.16■□□□□ 0.5
DSC1Q08554 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC18.16■□□□□ 0.5
DSC1Q08554 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.16■□□□□ 0.5
DSC1Q08554 LINC00628-201ENST00000628516 1289 ntBASIC18.16■□□□□ 0.5
DSC1Q08554 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.16■□□□□ 0.5
DSC1Q08554 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.16■□□□□ 0.5
DSC1Q08554 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
DSC1Q08554 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
DSC1Q08554 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DSC1Q08554 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
DSC1Q08554 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.15■□□□□ 0.5
DSC1Q08554 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
DSC1Q08554 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
DSC1Q08554 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
DSC1Q08554 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
DSC1Q08554 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC18.15■□□□□ 0.5
DSC1Q08554 FRMD8P1-201ENST00000440433 1524 ntBASIC18.15■□□□□ 0.5
DSC1Q08554 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
DSC1Q08554 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
DSC1Q08554 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC18.15■□□□□ 0.5
DSC1Q08554 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC18.15■□□□□ 0.5
DSC1Q08554 AC092474.2-201ENST00000424288 719 ntBASIC18.15■□□□□ 0.5
DSC1Q08554 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
DSC1Q08554 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
DSC1Q08554 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC18.15■□□□□ 0.5
DSC1Q08554 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC18.15■□□□□ 0.5
DSC1Q08554 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC18.15■□□□□ 0.5
DSC1Q08554 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
DSC1Q08554 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC18.15■□□□□ 0.5
DSC1Q08554 AC025678.2-201ENST00000562061 970 ntBASIC18.15■□□□□ 0.5
DSC1Q08554 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC18.15■□□□□ 0.5
DSC1Q08554 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.15■□□□□ 0.5
DSC1Q08554 GNAS-203ENST00000306120 1878 ntBASIC18.15■□□□□ 0.5
DSC1Q08554 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
DSC1Q08554 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
DSC1Q08554 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.15■□□□□ 0.5
DSC1Q08554 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
DSC1Q08554 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
DSC1Q08554 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
DSC1Q08554 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
DSC1Q08554 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
DSC1Q08554 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
DSC1Q08554 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
DSC1Q08554 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
DSC1Q08554 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
DSC1Q08554 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
DSC1Q08554 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.14■□□□□ 0.49
DSC1Q08554 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DSC1Q08554 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.14■□□□□ 0.49
DSC1Q08554 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.14■□□□□ 0.49
DSC1Q08554 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC18.14■□□□□ 0.49
DSC1Q08554 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DSC1Q08554 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DSC1Q08554 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DSC1Q08554 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
DSC1Q08554 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DSC1Q08554 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DSC1Q08554 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
DSC1Q08554 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
DSC1Q08554 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DSC1Q08554 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DSC1Q08554 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
DSC1Q08554 AL592309.1-201ENST00000443127 649 ntBASIC18.14■□□□□ 0.49
DSC1Q08554 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
DSC1Q08554 AC069335.1-201ENST00000489972 472 ntBASIC18.14■□□□□ 0.49
DSC1Q08554 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC18.14■□□□□ 0.49
DSC1Q08554 MTRF1LP2-201ENST00000506027 1122 ntBASIC18.14■□□□□ 0.49
DSC1Q08554 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
DSC1Q08554 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.14■□□□□ 0.49
DSC1Q08554 AC015911.4-201ENST00000588022 1070 ntBASIC18.14■□□□□ 0.49
DSC1Q08554 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC18.14■□□□□ 0.49
DSC1Q08554 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.14■□□□□ 0.49
DSC1Q08554 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
DSC1Q08554 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
DSC1Q08554 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
DSC1Q08554 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DSC1Q08554 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
DSC1Q08554 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.14■□□□□ 0.49
DSC1Q08554 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC18.14■□□□□ 0.49
DSC1Q08554 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
DSC1Q08554 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
DSC1Q08554 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.14■□□□□ 0.49
DSC1Q08554 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
DSC1Q08554 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
DSC1Q08554 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
DSC1Q08554 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.13■□□□□ 0.49
DSC1Q08554 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
DSC1Q08554 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.13■□□□□ 0.49
DSC1Q08554 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
DSC1Q08554 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
DSC1Q08554 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
DSC1Q08554 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
DSC1Q08554 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
DSC1Q08554 RNU1-129P-201ENST00000384064 167 ntBASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms