Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.3■□□□□ 0.36
MMP2P08253 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.3■□□□□ 0.36
MMP2P08253 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MMP2P08253 AC105339.3-201ENST00000560043 636 ntBASIC17.3■□□□□ 0.36
MMP2P08253 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.3■□□□□ 0.36
MMP2P08253 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.3■□□□□ 0.36
MMP2P08253 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.3■□□□□ 0.36
MMP2P08253 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
MMP2P08253 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MMP2P08253 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MMP2P08253 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MMP2P08253 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MMP2P08253 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
MMP2P08253 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
MMP2P08253 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MMP2P08253 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.3■□□□□ 0.36
MMP2P08253 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MMP2P08253 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.3■□□□□ 0.36
MMP2P08253 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
MMP2P08253 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MMP2P08253 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
MMP2P08253 AC105020.1-201ENST00000435356 2205 ntBASIC17.29■□□□□ 0.36
MMP2P08253 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MMP2P08253 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MMP2P08253 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MMP2P08253 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MMP2P08253 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MMP2P08253 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
MMP2P08253 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
MMP2P08253 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MMP2P08253 HLA-A-201ENST00000376802 1334 ntBASIC17.29■□□□□ 0.36
MMP2P08253 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
MMP2P08253 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
MMP2P08253 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
MMP2P08253 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MMP2P08253 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.29■□□□□ 0.36
MMP2P08253 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.29■□□□□ 0.36
MMP2P08253 RPS15P9-201ENST00000494093 319 ntBASIC17.29■□□□□ 0.36
MMP2P08253 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.29■□□□□ 0.36
MMP2P08253 AC136632.2-201ENST00000512891 861 ntBASIC17.29■□□□□ 0.36
MMP2P08253 AL356488.2-201ENST00000602755 427 ntBASIC17.29■□□□□ 0.36
MMP2P08253 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
MMP2P08253 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MMP2P08253 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MMP2P08253 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.29■□□□□ 0.36
MMP2P08253 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.29■□□□□ 0.36
MMP2P08253 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MMP2P08253 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
MMP2P08253 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.28■□□□□ 0.36
MMP2P08253 AC138932.1-201ENST00000534164 6830 ntBASIC17.28■□□□□ 0.36
MMP2P08253 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
MMP2P08253 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
MMP2P08253 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MMP2P08253 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
MMP2P08253 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.28■□□□□ 0.36
MMP2P08253 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MMP2P08253 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
MMP2P08253 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.28■□□□□ 0.36
MMP2P08253 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.28■□□□□ 0.36
MMP2P08253 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MMP2P08253 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.28■□□□□ 0.36
MMP2P08253 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.28■□□□□ 0.36
MMP2P08253 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
MMP2P08253 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.28■□□□□ 0.36
MMP2P08253 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
MMP2P08253 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
MMP2P08253 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
MMP2P08253 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
MMP2P08253 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
MMP2P08253 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
MMP2P08253 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.28■□□□□ 0.36
MMP2P08253 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MMP2P08253 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
MMP2P08253 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MMP2P08253 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.28■□□□□ 0.36
MMP2P08253 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MMP2P08253 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MMP2P08253 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MMP2P08253 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MMP2P08253 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MMP2P08253 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
MMP2P08253 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
MMP2P08253 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MMP2P08253 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MMP2P08253 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.27■□□□□ 0.36
MMP2P08253 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
MMP2P08253 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
MMP2P08253 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
MMP2P08253 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
MMP2P08253 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.27■□□□□ 0.36
MMP2P08253 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.27■□□□□ 0.36
MMP2P08253 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
MMP2P08253 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.27■□□□□ 0.36
MMP2P08253 RPS2P28-201ENST00000314255 741 ntBASIC17.27■□□□□ 0.36
MMP2P08253 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.27■□□□□ 0.36
MMP2P08253 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MMP2P08253 FDX1P1-201ENST00000449115 551 ntBASIC17.27■□□□□ 0.36
MMP2P08253 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.27■□□□□ 0.36
MMP2P08253 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
MMP2P08253 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms