Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TPM3P06753 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
TPM3P06753 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TPM3P06753 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TPM3P06753 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
TPM3P06753 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.35■□□□□ 0.69
TPM3P06753 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TPM3P06753 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TPM3P06753 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TPM3P06753 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TPM3P06753 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TPM3P06753 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TPM3P06753 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TPM3P06753 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC19.35■□□□□ 0.69
TPM3P06753 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TPM3P06753 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TPM3P06753 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.35■□□□□ 0.69
TPM3P06753 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.35■□□□□ 0.69
TPM3P06753 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.35■□□□□ 0.69
TPM3P06753 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.35■□□□□ 0.69
TPM3P06753 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TPM3P06753 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.35■□□□□ 0.69
TPM3P06753 AL139327.4-201ENST00000612362 153 ntBASIC19.35■□□□□ 0.69
TPM3P06753 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TPM3P06753 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
TPM3P06753 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC19.35■□□□□ 0.69
TPM3P06753 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TPM3P06753 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC19.35■□□□□ 0.69
TPM3P06753 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC19.35■□□□□ 0.69
TPM3P06753 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
TPM3P06753 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TPM3P06753 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TPM3P06753 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC19.35■□□□□ 0.69
TPM3P06753 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TPM3P06753 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TPM3P06753 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TPM3P06753 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
TPM3P06753 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TPM3P06753 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
TPM3P06753 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC19.34■□□□□ 0.69
TPM3P06753 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TPM3P06753 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TPM3P06753 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
TPM3P06753 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TPM3P06753 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TPM3P06753 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TPM3P06753 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TPM3P06753 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.34■□□□□ 0.69
TPM3P06753 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.34■□□□□ 0.69
TPM3P06753 HMGA1P5-201ENST00000412453 271 ntBASIC19.34■□□□□ 0.69
TPM3P06753 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TPM3P06753 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.34■□□□□ 0.69
TPM3P06753 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.34■□□□□ 0.69
TPM3P06753 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.34■□□□□ 0.69
TPM3P06753 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
TPM3P06753 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TPM3P06753 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TPM3P06753 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TPM3P06753 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TPM3P06753 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TPM3P06753 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC19.34■□□□□ 0.69
TPM3P06753 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TPM3P06753 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TPM3P06753 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TPM3P06753 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TPM3P06753 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TPM3P06753 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
TPM3P06753 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TPM3P06753 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.33■□□□□ 0.69
TPM3P06753 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC19.33■□□□□ 0.69
TPM3P06753 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TPM3P06753 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC19.33■□□□□ 0.69
TPM3P06753 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
TPM3P06753 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TPM3P06753 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TPM3P06753 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
TPM3P06753 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC19.33■□□□□ 0.69
TPM3P06753 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.33■□□□□ 0.68
TPM3P06753 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TPM3P06753 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.33■□□□□ 0.68
TPM3P06753 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.33■□□□□ 0.68
TPM3P06753 AC112698.1-201ENST00000510299 916 ntBASIC19.33■□□□□ 0.68
TPM3P06753 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.33■□□□□ 0.68
TPM3P06753 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.33■□□□□ 0.68
TPM3P06753 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.33■□□□□ 0.68
TPM3P06753 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.33■□□□□ 0.68
TPM3P06753 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
TPM3P06753 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
TPM3P06753 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TPM3P06753 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
TPM3P06753 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TPM3P06753 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TPM3P06753 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TPM3P06753 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TPM3P06753 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
TPM3P06753 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TPM3P06753 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
TPM3P06753 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC19.33■□□□□ 0.68
TPM3P06753 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TPM3P06753 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms