Protein–RNA interactions for Protein: Q9H0U4

RAB1B, Ras-related protein Rab-1B, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1BQ9H0U4 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RAB1BQ9H0U4 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAB1BQ9H0U4 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.54■□□□□ 0.88
RAB1BQ9H0U4 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.54■□□□□ 0.88
RAB1BQ9H0U4 AP004609.3-201ENST00000610705 1884 ntBASIC20.54■□□□□ 0.88
RAB1BQ9H0U4 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.53■□□□□ 0.88
RAB1BQ9H0U4 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAB1BQ9H0U4 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RAB1BQ9H0U4 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.53■□□□□ 0.88
RAB1BQ9H0U4 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAB1BQ9H0U4 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RAB1BQ9H0U4 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.53■□□□□ 0.88
RAB1BQ9H0U4 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAB1BQ9H0U4 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.53■□□□□ 0.88
RAB1BQ9H0U4 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RAB1BQ9H0U4 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
RAB1BQ9H0U4 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
RAB1BQ9H0U4 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAB1BQ9H0U4 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAB1BQ9H0U4 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAB1BQ9H0U4 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAB1BQ9H0U4 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RAB1BQ9H0U4 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RAB1BQ9H0U4 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.52■□□□□ 0.88
RAB1BQ9H0U4 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RAB1BQ9H0U4 AC087393.1-201ENST00000582896 145 ntBASIC20.52■□□□□ 0.88
RAB1BQ9H0U4 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RAB1BQ9H0U4 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
RAB1BQ9H0U4 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RAB1BQ9H0U4 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RAB1BQ9H0U4 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RAB1BQ9H0U4 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RAB1BQ9H0U4 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RAB1BQ9H0U4 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
RAB1BQ9H0U4 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RAB1BQ9H0U4 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC20.5■□□□□ 0.87
RAB1BQ9H0U4 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC20.5■□□□□ 0.87
RAB1BQ9H0U4 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RAB1BQ9H0U4 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.5■□□□□ 0.87
RAB1BQ9H0U4 RPS2P7-201ENST00000447334 885 ntBASIC20.5■□□□□ 0.87
RAB1BQ9H0U4 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RAB1BQ9H0U4 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RAB1BQ9H0U4 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RAB1BQ9H0U4 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.49■□□□□ 0.87
RAB1BQ9H0U4 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RAB1BQ9H0U4 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.49■□□□□ 0.87
RAB1BQ9H0U4 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.49■□□□□ 0.87
RAB1BQ9H0U4 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RAB1BQ9H0U4 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RAB1BQ9H0U4 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RAB1BQ9H0U4 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
RAB1BQ9H0U4 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RAB1BQ9H0U4 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RAB1BQ9H0U4 MIR4508-201ENST00000584178 70 ntBASIC20.48■□□□□ 0.87
RAB1BQ9H0U4 AC019171.1-201ENST00000601251 1056 ntBASIC20.48■□□□□ 0.87
RAB1BQ9H0U4 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RAB1BQ9H0U4 PVT1_1.1-201ENST00000615125 194 ntBASIC20.47■□□□□ 0.87
RAB1BQ9H0U4 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RAB1BQ9H0U4 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.47■□□□□ 0.87
RAB1BQ9H0U4 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAB1BQ9H0U4 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAB1BQ9H0U4 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAB1BQ9H0U4 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.46■□□□□ 0.87
RAB1BQ9H0U4 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RAB1BQ9H0U4 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RAB1BQ9H0U4 SHF-206ENST00000560471 2499 ntTSL 5 BASIC20.46■□□□□ 0.87
RAB1BQ9H0U4 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.45■□□□□ 0.86
RAB1BQ9H0U4 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
RAB1BQ9H0U4 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.45■□□□□ 0.86
RAB1BQ9H0U4 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
RAB1BQ9H0U4 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RAB1BQ9H0U4 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.45■□□□□ 0.86
RAB1BQ9H0U4 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RAB1BQ9H0U4 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.45■□□□□ 0.86
RAB1BQ9H0U4 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC20.45■□□□□ 0.86
RAB1BQ9H0U4 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
RAB1BQ9H0U4 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.44■□□□□ 0.86
RAB1BQ9H0U4 AC103834.1-201ENST00000520383 144 ntBASIC20.44■□□□□ 0.86
RAB1BQ9H0U4 AL451085.2-201ENST00000605085 799 ntBASIC20.44■□□□□ 0.86
RAB1BQ9H0U4 AL035685.1-201ENST00000636663 812 ntBASIC20.44■□□□□ 0.86
RAB1BQ9H0U4 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RAB1BQ9H0U4 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RAB1BQ9H0U4 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.43■□□□□ 0.86
RAB1BQ9H0U4 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
RAB1BQ9H0U4 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RAB1BQ9H0U4 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
RAB1BQ9H0U4 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RAB1BQ9H0U4 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RAB1BQ9H0U4 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RAB1BQ9H0U4 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RAB1BQ9H0U4 LONRF2P2-201ENST00000439212 571 ntBASIC20.41■□□□□ 0.86
RAB1BQ9H0U4 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.41■□□□□ 0.86
RAB1BQ9H0U4 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
RAB1BQ9H0U4 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAB1BQ9H0U4 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.41■□□□□ 0.86
RAB1BQ9H0U4 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RAB1BQ9H0U4 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAB1BQ9H0U4 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAB1BQ9H0U4 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAB1BQ9H0U4 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms