Protein–RNA interactions for Protein: Q8ND90

PNMA1, Paraneoplastic antigen Ma1, humanhuman

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA1Q8ND90 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
PNMA1Q8ND90 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
PNMA1Q8ND90 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
PNMA1Q8ND90 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC28.34■■■□□ 2.13
PNMA1Q8ND90 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
PNMA1Q8ND90 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC28.33■■■□□ 2.13
PNMA1Q8ND90 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
PNMA1Q8ND90 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC28.33■■■□□ 2.13
PNMA1Q8ND90 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
PNMA1Q8ND90 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC28.32■■■□□ 2.12
PNMA1Q8ND90 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC28.32■■■□□ 2.12
PNMA1Q8ND90 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
PNMA1Q8ND90 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
PNMA1Q8ND90 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC28.32■■■□□ 2.12
PNMA1Q8ND90 DUX4L18-201ENST00000553347 1267 ntBASIC28.31■■■□□ 2.12
PNMA1Q8ND90 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC28.3■■■□□ 2.12
PNMA1Q8ND90 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
PNMA1Q8ND90 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
PNMA1Q8ND90 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
PNMA1Q8ND90 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
PNMA1Q8ND90 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC28.29■■■□□ 2.12
PNMA1Q8ND90 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC28.28■■■□□ 2.12
PNMA1Q8ND90 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC28.28■■■□□ 2.12
PNMA1Q8ND90 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
PNMA1Q8ND90 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC28.28■■■□□ 2.12
PNMA1Q8ND90 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC28.28■■■□□ 2.12
PNMA1Q8ND90 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC28.28■■■□□ 2.12
PNMA1Q8ND90 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
PNMA1Q8ND90 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC28.27■■■□□ 2.12
PNMA1Q8ND90 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
PNMA1Q8ND90 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC28.27■■■□□ 2.12
PNMA1Q8ND90 GUK1-208ENST00000366728 842 ntTSL 2 BASIC28.27■■■□□ 2.12
PNMA1Q8ND90 AC018755.3-202ENST00000596210 929 ntBASIC28.27■■■□□ 2.12
PNMA1Q8ND90 MIR6765-201ENST00000614092 87 ntBASIC28.27■■■□□ 2.12
PNMA1Q8ND90 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC28.27■■■□□ 2.12
PNMA1Q8ND90 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
PNMA1Q8ND90 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC28.26■■■□□ 2.12
PNMA1Q8ND90 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC28.26■■■□□ 2.12
PNMA1Q8ND90 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
PNMA1Q8ND90 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC28.26■■■□□ 2.11
PNMA1Q8ND90 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC28.26■■■□□ 2.11
PNMA1Q8ND90 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
PNMA1Q8ND90 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
PNMA1Q8ND90 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
PNMA1Q8ND90 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
PNMA1Q8ND90 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
PNMA1Q8ND90 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
PNMA1Q8ND90 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC28.25■■■□□ 2.11
PNMA1Q8ND90 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC28.25■■■□□ 2.11
PNMA1Q8ND90 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
PNMA1Q8ND90 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
PNMA1Q8ND90 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
PNMA1Q8ND90 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
PNMA1Q8ND90 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC28.24■■■□□ 2.11
PNMA1Q8ND90 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC28.23■■■□□ 2.11
PNMA1Q8ND90 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC28.23■■■□□ 2.11
PNMA1Q8ND90 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC28.23■■■□□ 2.11
PNMA1Q8ND90 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC28.23■■■□□ 2.11
PNMA1Q8ND90 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC28.23■■■□□ 2.11
PNMA1Q8ND90 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
PNMA1Q8ND90 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC28.22■■■□□ 2.11
PNMA1Q8ND90 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
PNMA1Q8ND90 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC28.22■■■□□ 2.11
PNMA1Q8ND90 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
PNMA1Q8ND90 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC28.22■■■□□ 2.11
PNMA1Q8ND90 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC28.22■■■□□ 2.11
PNMA1Q8ND90 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
PNMA1Q8ND90 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC28.21■■■□□ 2.11
PNMA1Q8ND90 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC28.21■■■□□ 2.11
PNMA1Q8ND90 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
PNMA1Q8ND90 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC28.21■■■□□ 2.11
PNMA1Q8ND90 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
PNMA1Q8ND90 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC28.21■■■□□ 2.11
PNMA1Q8ND90 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC28.21■■■□□ 2.11
PNMA1Q8ND90 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
PNMA1Q8ND90 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
PNMA1Q8ND90 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC28.19■■■□□ 2.1
PNMA1Q8ND90 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
PNMA1Q8ND90 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC28.19■■■□□ 2.1
PNMA1Q8ND90 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
PNMA1Q8ND90 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC28.18■■■□□ 2.1
PNMA1Q8ND90 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
PNMA1Q8ND90 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC28.18■■■□□ 2.1
PNMA1Q8ND90 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
PNMA1Q8ND90 IDNK-203ENST00000405990 629 ntTSL 2 BASIC28.18■■■□□ 2.1
PNMA1Q8ND90 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC28.18■■■□□ 2.1
PNMA1Q8ND90 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
PNMA1Q8ND90 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
PNMA1Q8ND90 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC28.18■■■□□ 2.1
PNMA1Q8ND90 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
PNMA1Q8ND90 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC28.17■■■□□ 2.1
PNMA1Q8ND90 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC28.17■■■□□ 2.1
PNMA1Q8ND90 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
PNMA1Q8ND90 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
PNMA1Q8ND90 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
PNMA1Q8ND90 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
PNMA1Q8ND90 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
PNMA1Q8ND90 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
PNMA1Q8ND90 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
PNMA1Q8ND90 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC28.15■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms