Protein–RNA interactions for Protein: Q8N9A8

CNEP1R1, Nuclear envelope phosphatase-regulatory subunit 1, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1Q8N9A8 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CNEP1R1Q8N9A8 KRT8P33-201ENST00000508125 1423 ntBASIC21.5■■□□□ 1.03
CNEP1R1Q8N9A8 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.5■■□□□ 1.03
CNEP1R1Q8N9A8 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CNEP1R1Q8N9A8 AC074183.2-201ENST00000623112 922 ntBASIC21.5■■□□□ 1.03
CNEP1R1Q8N9A8 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CNEP1R1Q8N9A8 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CNEP1R1Q8N9A8 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CNEP1R1Q8N9A8 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CNEP1R1Q8N9A8 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.49■■□□□ 1.03
CNEP1R1Q8N9A8 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.49■■□□□ 1.03
CNEP1R1Q8N9A8 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CNEP1R1Q8N9A8 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CNEP1R1Q8N9A8 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
CNEP1R1Q8N9A8 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CNEP1R1Q8N9A8 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.48■■□□□ 1.03
CNEP1R1Q8N9A8 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CNEP1R1Q8N9A8 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CNEP1R1Q8N9A8 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CNEP1R1Q8N9A8 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CNEP1R1Q8N9A8 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.47■■□□□ 1.03
CNEP1R1Q8N9A8 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC21.47■■□□□ 1.03
CNEP1R1Q8N9A8 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
CNEP1R1Q8N9A8 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
CNEP1R1Q8N9A8 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.46■■□□□ 1.03
CNEP1R1Q8N9A8 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.46■■□□□ 1.03
CNEP1R1Q8N9A8 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.46■■□□□ 1.03
CNEP1R1Q8N9A8 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CNEP1R1Q8N9A8 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.46■■□□□ 1.03
CNEP1R1Q8N9A8 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CNEP1R1Q8N9A8 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.45■■□□□ 1.02
CNEP1R1Q8N9A8 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CNEP1R1Q8N9A8 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.45■■□□□ 1.02
CNEP1R1Q8N9A8 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
CNEP1R1Q8N9A8 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CNEP1R1Q8N9A8 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
CNEP1R1Q8N9A8 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CNEP1R1Q8N9A8 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CNEP1R1Q8N9A8 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
CNEP1R1Q8N9A8 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CNEP1R1Q8N9A8 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.44■■□□□ 1.02
CNEP1R1Q8N9A8 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CNEP1R1Q8N9A8 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.44■■□□□ 1.02
CNEP1R1Q8N9A8 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CNEP1R1Q8N9A8 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CNEP1R1Q8N9A8 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CNEP1R1Q8N9A8 YBX1P4-201ENST00000392794 808 ntBASIC21.43■■□□□ 1.02
CNEP1R1Q8N9A8 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CNEP1R1Q8N9A8 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CNEP1R1Q8N9A8 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.43■■□□□ 1.02
CNEP1R1Q8N9A8 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.43■■□□□ 1.02
CNEP1R1Q8N9A8 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CNEP1R1Q8N9A8 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CNEP1R1Q8N9A8 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CNEP1R1Q8N9A8 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CNEP1R1Q8N9A8 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CNEP1R1Q8N9A8 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.42■■□□□ 1.02
CNEP1R1Q8N9A8 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21.42■■□□□ 1.02
CNEP1R1Q8N9A8 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CNEP1R1Q8N9A8 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CNEP1R1Q8N9A8 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CNEP1R1Q8N9A8 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.41■■□□□ 1.02
CNEP1R1Q8N9A8 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.41■■□□□ 1.02
CNEP1R1Q8N9A8 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21.41■■□□□ 1.02
CNEP1R1Q8N9A8 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.41■■□□□ 1.02
CNEP1R1Q8N9A8 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.41■■□□□ 1.02
CNEP1R1Q8N9A8 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CNEP1R1Q8N9A8 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.4■■□□□ 1.02
CNEP1R1Q8N9A8 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CNEP1R1Q8N9A8 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CNEP1R1Q8N9A8 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CNEP1R1Q8N9A8 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CNEP1R1Q8N9A8 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CNEP1R1Q8N9A8 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CNEP1R1Q8N9A8 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC21.39■■□□□ 1.01
CNEP1R1Q8N9A8 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CNEP1R1Q8N9A8 RPS2P7-201ENST00000447334 885 ntBASIC21.39■■□□□ 1.01
CNEP1R1Q8N9A8 PVT1_1.1-201ENST00000615125 194 ntBASIC21.39■■□□□ 1.01
CNEP1R1Q8N9A8 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.39■■□□□ 1.01
CNEP1R1Q8N9A8 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CNEP1R1Q8N9A8 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CNEP1R1Q8N9A8 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CNEP1R1Q8N9A8 AC087393.1-201ENST00000582896 145 ntBASIC21.38■■□□□ 1.01
CNEP1R1Q8N9A8 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CNEP1R1Q8N9A8 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CNEP1R1Q8N9A8 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.37■■□□□ 1.01
CNEP1R1Q8N9A8 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CNEP1R1Q8N9A8 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CNEP1R1Q8N9A8 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CNEP1R1Q8N9A8 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CNEP1R1Q8N9A8 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CNEP1R1Q8N9A8 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CNEP1R1Q8N9A8 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CNEP1R1Q8N9A8 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.37■■□□□ 1.01
CNEP1R1Q8N9A8 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.37■■□□□ 1.01
CNEP1R1Q8N9A8 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.37■■□□□ 1.01
CNEP1R1Q8N9A8 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CNEP1R1Q8N9A8 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
CNEP1R1Q8N9A8 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
CNEP1R1Q8N9A8 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 167.1 ms