Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PDX1P52945 LINC01003-201ENST00000564834 1764 ntBASIC23.55■■□□□ 1.36
PDX1P52945 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
PDX1P52945 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
PDX1P52945 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
PDX1P52945 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC23.54■■□□□ 1.36
PDX1P52945 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
PDX1P52945 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PDX1P52945 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
PDX1P52945 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
PDX1P52945 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
PDX1P52945 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PDX1P52945 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
PDX1P52945 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PDX1P52945 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC23.53■■□□□ 1.36
PDX1P52945 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC23.53■■□□□ 1.36
PDX1P52945 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC23.52■■□□□ 1.36
PDX1P52945 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
PDX1P52945 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
PDX1P52945 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
PDX1P52945 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC23.52■■□□□ 1.36
PDX1P52945 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PDX1P52945 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.35
PDX1P52945 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
PDX1P52945 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC23.51■■□□□ 1.35
PDX1P52945 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC23.51■■□□□ 1.35
PDX1P52945 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
PDX1P52945 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
PDX1P52945 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PDX1P52945 HES6-204ENST00000409182 863 ntTSL 2 BASIC23.5■■□□□ 1.35
PDX1P52945 GUSBP5-201ENST00000418136 578 ntBASIC23.5■■□□□ 1.35
PDX1P52945 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC23.5■■□□□ 1.35
PDX1P52945 AC103724.3-201ENST00000564481 992 ntBASIC23.5■■□□□ 1.35
PDX1P52945 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
PDX1P52945 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PDX1P52945 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
PDX1P52945 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PDX1P52945 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
PDX1P52945 OR2A1-AS1-204ENST00000470435 602 ntBASIC23.49■■□□□ 1.35
PDX1P52945 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
PDX1P52945 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC23.49■■□□□ 1.35
PDX1P52945 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
PDX1P52945 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC23.48■■□□□ 1.35
PDX1P52945 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PDX1P52945 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
PDX1P52945 AL592295.1-201ENST00000400984 884 ntBASIC23.47■■□□□ 1.35
PDX1P52945 PRTG-204ENST00000561292 833 ntTSL 3 BASIC23.47■■□□□ 1.35
PDX1P52945 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC23.47■■□□□ 1.35
PDX1P52945 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
PDX1P52945 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PDX1P52945 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
PDX1P52945 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC23.46■■□□□ 1.35
PDX1P52945 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC23.46■■□□□ 1.35
PDX1P52945 MTX2-204ENST00000443241 799 ntTSL 3 BASIC23.46■■□□□ 1.35
PDX1P52945 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
PDX1P52945 AL121749.1-202ENST00000609313 2153 ntBASIC23.46■■□□□ 1.35
PDX1P52945 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC23.46■■□□□ 1.35
PDX1P52945 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC23.45■■□□□ 1.34
PDX1P52945 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
PDX1P52945 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
PDX1P52945 AL031848.2-201ENST00000607670 837 ntBASIC23.45■■□□□ 1.34
PDX1P52945 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC23.45■■□□□ 1.34
PDX1P52945 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC23.44■■□□□ 1.34
PDX1P52945 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
PDX1P52945 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
PDX1P52945 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC23.44■■□□□ 1.34
PDX1P52945 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
PDX1P52945 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
PDX1P52945 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
PDX1P52945 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC23.43■■□□□ 1.34
PDX1P52945 SHF-208ENST00000560734 1731 ntTSL 3 BASIC23.43■■□□□ 1.34
PDX1P52945 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC23.43■■□□□ 1.34
PDX1P52945 AC087393.1-201ENST00000582896 145 ntBASIC23.43■■□□□ 1.34
PDX1P52945 AC019171.1-201ENST00000601251 1056 ntBASIC23.43■■□□□ 1.34
PDX1P52945 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
PDX1P52945 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC23.43■■□□□ 1.34
PDX1P52945 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
PDX1P52945 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
PDX1P52945 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
PDX1P52945 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC23.42■■□□□ 1.34
PDX1P52945 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
PDX1P52945 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PDX1P52945 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC23.41■■□□□ 1.34
PDX1P52945 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PDX1P52945 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC23.41■■□□□ 1.34
PDX1P52945 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC23.41■■□□□ 1.34
PDX1P52945 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC23.41■■□□□ 1.34
PDX1P52945 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
PDX1P52945 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC23.41■■□□□ 1.34
PDX1P52945 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
PDX1P52945 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
PDX1P52945 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC23.4■■□□□ 1.34
PDX1P52945 AC131212.1-201ENST00000613771 668 ntBASIC23.4■■□□□ 1.34
PDX1P52945 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PDX1P52945 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
PDX1P52945 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PDX1P52945 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.34
PDX1P52945 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
PDX1P52945 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
PDX1P52945 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms