Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC31.17■■■□□ 2.58
COL15A1P39059 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
COL15A1P39059 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
COL15A1P39059 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC31.16■■■□□ 2.58
COL15A1P39059 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
COL15A1P39059 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
COL15A1P39059 LINC01003-201ENST00000564834 1764 ntBASIC31.15■■■□□ 2.58
COL15A1P39059 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
COL15A1P39059 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC31.14■■■□□ 2.58
COL15A1P39059 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC31.14■■■□□ 2.58
COL15A1P39059 RPS2P7-201ENST00000447334 885 ntBASIC31.14■■■□□ 2.58
COL15A1P39059 RNF146-205ENST00000477776 762 ntTSL 3 BASIC31.14■■■□□ 2.58
COL15A1P39059 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC31.14■■■□□ 2.57
COL15A1P39059 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC31.13■■■□□ 2.57
COL15A1P39059 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC31.13■■■□□ 2.57
COL15A1P39059 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC31.13■■■□□ 2.57
COL15A1P39059 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
COL15A1P39059 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC31.12■■■□□ 2.57
COL15A1P39059 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC31.12■■■□□ 2.57
COL15A1P39059 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
COL15A1P39059 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC31.12■■■□□ 2.57
COL15A1P39059 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC31.11■■■□□ 2.57
COL15A1P39059 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC31.11■■■□□ 2.57
COL15A1P39059 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC31.11■■■□□ 2.57
COL15A1P39059 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
COL15A1P39059 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
COL15A1P39059 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC31.1■■■□□ 2.57
COL15A1P39059 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC31.1■■■□□ 2.57
COL15A1P39059 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
COL15A1P39059 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC31.1■■■□□ 2.57
COL15A1P39059 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
COL15A1P39059 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC31.1■■■□□ 2.57
COL15A1P39059 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC31.1■■■□□ 2.57
COL15A1P39059 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC31.09■■■□□ 2.57
COL15A1P39059 LONRF2P2-201ENST00000439212 571 ntBASIC31.09■■■□□ 2.57
COL15A1P39059 TK2-216ENST00000564917 1156 ntTSL 3 BASIC31.09■■■□□ 2.57
COL15A1P39059 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC31.09■■■□□ 2.57
COL15A1P39059 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC31.09■■■□□ 2.57
COL15A1P39059 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
COL15A1P39059 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC31.08■■■□□ 2.57
COL15A1P39059 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC31.08■■■□□ 2.57
COL15A1P39059 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
COL15A1P39059 AC239859.2-201ENST00000444165 318 ntBASIC31.08■■■□□ 2.57
COL15A1P39059 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC31.08■■■□□ 2.57
COL15A1P39059 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
COL15A1P39059 AC142086.6-201ENST00000621154 1765 ntBASIC31.08■■■□□ 2.57
COL15A1P39059 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC31.07■■■□□ 2.56
COL15A1P39059 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
COL15A1P39059 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
COL15A1P39059 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
COL15A1P39059 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
COL15A1P39059 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
COL15A1P39059 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC31.06■■■□□ 2.56
COL15A1P39059 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
COL15A1P39059 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC31.06■■■□□ 2.56
COL15A1P39059 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
COL15A1P39059 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
COL15A1P39059 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC31.06■■■□□ 2.56
COL15A1P39059 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC31.06■■■□□ 2.56
COL15A1P39059 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
COL15A1P39059 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
COL15A1P39059 Z92544.1-202ENST00000571933 1220 ntBASIC31.05■■■□□ 2.56
COL15A1P39059 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC31.05■■■□□ 2.56
COL15A1P39059 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC31.04■■■□□ 2.56
COL15A1P39059 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC31.04■■■□□ 2.56
COL15A1P39059 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC31.04■■■□□ 2.56
COL15A1P39059 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC31.04■■■□□ 2.56
COL15A1P39059 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
COL15A1P39059 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC31.03■■■□□ 2.56
COL15A1P39059 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC31.03■■■□□ 2.56
COL15A1P39059 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC31.03■■■□□ 2.56
COL15A1P39059 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC31.03■■■□□ 2.56
COL15A1P39059 SHF-206ENST00000560471 2499 ntTSL 5 BASIC31.03■■■□□ 2.56
COL15A1P39059 BX255925.1-201ENST00000566954 1854 ntBASIC31.02■■■□□ 2.56
COL15A1P39059 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
COL15A1P39059 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
COL15A1P39059 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC31■■■□□ 2.55
COL15A1P39059 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC31■■■□□ 2.55
COL15A1P39059 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC31■■■□□ 2.55
COL15A1P39059 CREM-229ENST00000474362 1030 ntTSL 2 BASIC31■■■□□ 2.55
COL15A1P39059 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC31■■■□□ 2.55
COL15A1P39059 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC30.99■■■□□ 2.55
COL15A1P39059 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
COL15A1P39059 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC30.99■■■□□ 2.55
COL15A1P39059 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC30.99■■■□□ 2.55
COL15A1P39059 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC30.98■■■□□ 2.55
COL15A1P39059 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC30.98■■■□□ 2.55
COL15A1P39059 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC30.98■■■□□ 2.55
COL15A1P39059 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
COL15A1P39059 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
COL15A1P39059 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
COL15A1P39059 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
COL15A1P39059 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC30.98■■■□□ 2.55
COL15A1P39059 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC30.97■■■□□ 2.55
COL15A1P39059 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC30.97■■■□□ 2.55
COL15A1P39059 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC30.97■■■□□ 2.55
COL15A1P39059 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
COL15A1P39059 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
COL15A1P39059 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
COL15A1P39059 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC30.96■■■□□ 2.55
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms