Protein–RNA interactions for Protein: P33240

CSTF2, Cleavage stimulation factor subunit 2, humanhuman

Known RBP eCLIP

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2P33240 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.46□□□□□ -0.268e-8■■■■□ 26.2
CSTF2P33240 AC007388.1-207ENST00000446698 593 ntTSL 512.28□□□□□ -0.448e-8■■■■□ 26.2
CSTF2P33240 AC007388.1-201ENST00000426083 1438 ntTSL 1 (best) BASIC7.17□□□□□ -1.268e-8■■■■□ 26.2
CSTF2P33240 SLC22A23-206ENST00000467144 542 ntTSL 413.37□□□□□ -0.272e-7■■■■□ 26.2
CSTF2P33240 SLC22A23-211ENST00000496753 561 ntTSL 411.68□□□□□ -0.542e-7■■■■□ 26.2
CSTF2P33240 SND1-201ENST00000354725 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.682e-7■■■■□ 26.1
CSTF2P33240 SND1-206ENST00000468166 552 ntTSL 47.49□□□□□ -1.212e-7■■■■□ 26.1
CSTF2P33240 SND1-204ENST00000465900 630 ntTSL 46.61□□□□□ -1.352e-7■■■■□ 26.1
CSTF2P33240 CCNH-208ENST00000510921 549 ntTSL 42.74□□□□□ -1.977e-7■■■■□ 26.1
CSTF2P33240 CCNH-205ENST00000505587 1940 ntTSL 21.56□□□□□ -2.167e-7■■■■□ 26.1
CSTF2P33240 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.015e-7■■■■□ 26.1
CSTF2P33240 RAB6A-206ENST00000540771 699 ntTSL 521.59■■□□□ 1.052e-9■■■■□ 26.1
CSTF2P33240 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.29■■□□□ 12e-9■■■■□ 26.1
CSTF2P33240 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.2■□□□□ 0.52e-9■■■■□ 26.1
CSTF2P33240 OSMR-AS1-203ENST00000513480 583 ntTSL 415.83■□□□□ 0.122e-9■■■■□ 26.1
CSTF2P33240 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC13.18□□□□□ -0.32e-9■■■■□ 26.1
CSTF2P33240 ZCCHC14-204ENST00000568020 6242 ntTSL 1 (best)12.48□□□□□ -0.412e-9■■■■□ 26.1
CSTF2P33240 RAB6A-201ENST00000310653 3389 ntAPPRIS P5 TSL 1 (best) BASIC12.18□□□□□ -0.462e-9■■■■□ 26.1
CSTF2P33240 ZCCHC14-201ENST00000268616 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.472e-9■■■■□ 26.1
CSTF2P33240 RAB6A-202ENST00000336083 3085 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.52e-9■■■■□ 26.1
CSTF2P33240 AC105429.1-201ENST00000612833 4001 ntBASIC10.79□□□□□ -0.682e-9■■■■□ 26.1
CSTF2P33240 RAB6A-209ENST00000541973 1104 ntTSL 2 BASIC9.05□□□□□ -0.962e-9■■■■□ 26.1
CSTF2P33240 RAB6A-205ENST00000537446 447 ntTSL 36.87□□□□□ -1.312e-9■■■■□ 26.1
CSTF2P33240 RAB6A-210ENST00000545625 447 ntTSL 36.58□□□□□ -1.362e-9■■■■□ 26.1
CSTF2P33240 LRCH3-204ENST00000428136 3205 ntTSL 57.5□□□□□ -1.217e-8■■■■□ 26.1
CSTF2P33240 LRCH3-215ENST00000476664 227 ntTSL 36.14□□□□□ -1.437e-8■■■■□ 26.1
CSTF2P33240 LRCH3-214ENST00000473177 520 ntTSL 44.64□□□□□ -1.677e-8■■■■□ 26.1
CSTF2P33240 LRCH3-213ENST00000471667 586 ntTSL 43.9□□□□□ -1.797e-8■■■■□ 26.1
CSTF2P33240 ETS2-203ENST00000432278 1033 ntTSL 518.95■□□□□ 0.622e-6■■■■□ 26.1
CSTF2P33240 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.352e-6■■■■□ 26.1
CSTF2P33240 ETS2-202ENST00000360938 3766 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.652e-6■■■■□ 26.1
CSTF2P33240 ARID1B-227ENST00000637568 4610 ntTSL 512.57□□□□□ -0.43e-8■■■■□ 26.1
CSTF2P33240 ARID1B-223ENST00000637015 5284 ntAPPRIS ALT2 TSL 512.11□□□□□ -0.473e-8■■■■□ 26.1
CSTF2P33240 ARID1B-230ENST00000637810 5073 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.663e-8■■■■□ 26.1
CSTF2P33240 ARID1B-210ENST00000635849 5830 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.763e-8■■■■□ 26.1
CSTF2P33240 ARID1B-221ENST00000636940 5910 ntTSL 510.24□□□□□ -0.773e-8■■■■□ 26.1
CSTF2P33240 ARID1B-232ENST00000637904 5913 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.783e-8■■■■□ 26.1
CSTF2P33240 ARID1B-212ENST00000635957 4048 ntAPPRIS ALT2 TSL 59.33□□□□□ -0.923e-8■■■■□ 26.1
CSTF2P33240 ARID1B-229ENST00000637741 3915 ntTSL 57.45□□□□□ -1.223e-8■■■■□ 26.1
CSTF2P33240 TXNL4B-204ENST00000562153 581 ntTSL 412.39□□□□□ -0.437e-8■■■■□ 26.1
CSTF2P33240 RAD51B-203ENST00000468382 829 ntTSL 56.38□□□□□ -1.392e-6■■■■□ 26
CSTF2P33240 INSIG2-201ENST00000245787 2590 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.149e-7■■■■□ 26
CSTF2P33240 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.425e-7■■■■□ 26
CSTF2P33240 SPAG9-215ENST00000513746 822 ntTSL 516.44■□□□□ 0.225e-7■■■■□ 26
CSTF2P33240 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.2■□□□□ 0.54e-7■■■■□ 26
CSTF2P33240 TXNDC12-204ENST00000472624 800 ntTSL 513.55□□□□□ -0.244e-7■■■■□ 26
CSTF2P33240 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.314e-7■■■■□ 26
CSTF2P33240 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.477e-9■■■■□ 26
CSTF2P33240 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.99■□□□□ 0.477e-9■■■■□ 26
CSTF2P33240 ZFAND2A-202ENST00000397083 852 ntTSL 1 (best)17.99■□□□□ 0.477e-9■■■■□ 26
CSTF2P33240 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.231e-7■■■■□ 26
CSTF2P33240 SMOC1-202ENST00000381280 3666 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.581e-7■■■■□ 26
CSTF2P33240 INS-IGF2-205ENST00000641326 2861 ntAPPRIS P1 BASIC11.4□□□□□ -0.581e-23■■■■□ 25.9
CSTF2P33240 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.092e-9■■■■□ 25.9
CSTF2P33240 MALSU1-203ENST00000476623 479 ntTSL 24.56□□□□□ -1.682e-9■■■■□ 25.9
CSTF2P33240 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.743e-6■■■■□ 25.9
CSTF2P33240 PRKAR1B-202ENST00000400758 888 ntTSL 324.8■■□□□ 1.563e-6■■■■□ 25.9
CSTF2P33240 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.253e-6■■■■□ 25.9
CSTF2P33240 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.893e-6■■■■□ 25.9
CSTF2P33240 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.533e-6■■■■□ 25.9
CSTF2P33240 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.33e-6■■■■□ 25.9
CSTF2P33240 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.44□□□□□ -0.12e-6■■■■□ 25.9
CSTF2P33240 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.12e-6■■■■□ 25.9
CSTF2P33240 PCNX1-207ENST00000554691 4204 ntTSL 1 (best)6.3□□□□□ -1.42e-6■■■■□ 25.9
CSTF2P33240 PCNX1-214ENST00000556849 595 ntTSL 45.4□□□□□ -1.542e-6■■■■□ 25.9
CSTF2P33240 ZFP36L1-206ENST00000557086 727 ntTSL 216.68■□□□□ 0.264e-7■■■■□ 25.8
CSTF2P33240 ZFP36L1-203ENST00000553375 633 ntTSL 216.29■□□□□ 0.24e-7■■■■□ 25.8
CSTF2P33240 ZFP36L1-205ENST00000557022 577 ntTSL 515.12■□□□□ 0.014e-7■■■■□ 25.8
CSTF2P33240 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.174e-7■■■■□ 25.8
CSTF2P33240 ENPP1-203ENST00000486853 732 ntTSL 229.3■■■□□ 2.282e-8■■■■□ 25.8
CSTF2P33240 ENPP1-204ENST00000513998 3107 ntTSL 519.4■□□□□ 0.72e-8■■■■□ 25.8
CSTF2P33240 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.322e-8■■■■□ 25.8
CSTF2P33240 ROCK2-201ENST00000261535 1795 ntTSL 520.54■□□□□ 0.881e-8■■■■□ 25.8
CSTF2P33240 ROCK2-206ENST00000462366 563 ntTSL 34.83□□□□□ -1.641e-8■■■■□ 25.8
CSTF2P33240 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.136e-18■■■■□ 25.8
CSTF2P33240 TBCK-215ENST00000509532 848 ntTSL 511.74□□□□□ -0.535e-8■■■■□ 25.8
CSTF2P33240 TBCK-216ENST00000509862 600 ntTSL 43.75□□□□□ -1.815e-8■■■■□ 25.8
CSTF2P33240 TBCK-210ENST00000506280 532 ntTSL 53.64□□□□□ -1.835e-8■■■■□ 25.8
CSTF2P33240 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC26.89■■□□□ 1.93e-6■■■■□ 25.8
CSTF2P33240 AC010997.3-201ENST00000418818 502 ntTSL 3 BASIC12.11□□□□□ -0.473e-7■■■■□ 25.7
CSTF2P33240 RFX3-210ENST00000457373 822 ntTSL 59.81□□□□□ -0.844e-9■■■■□ 25.7
CSTF2P33240 RFX3-201ENST00000302303 1522 ntTSL 1 (best) BASIC9.02□□□□□ -0.974e-9■■■■□ 25.7
CSTF2P33240 RFX3-207ENST00000449190 869 ntTSL 38.86□□□□□ -0.994e-9■■■■□ 25.7
CSTF2P33240 RFX3-209ENST00000451859 740 ntTSL 38.55□□□□□ -1.044e-9■■■■□ 25.7
CSTF2P33240 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.464e-9■■■■□ 25.7
CSTF2P33240 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.494e-9■■■■□ 25.7
CSTF2P33240 SNTB1-204ENST00000519298 414 ntTSL 35.4□□□□□ -1.541e-6■■■■□ 25.7
CSTF2P33240 POLR1D-210ENST00000627604 565 ntTSL 421.41■■□□□ 1.023e-9■■■■□ 25.7
CSTF2P33240 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.82■□□□□ 0.63e-9■■■■□ 25.7
CSTF2P33240 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.91■□□□□ 0.33e-9■■■■□ 25.7
CSTF2P33240 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.72■□□□□ 0.273e-9■■■■□ 25.7
CSTF2P33240 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.32■□□□□ 0.043e-9■■■■□ 25.7
CSTF2P33240 POLR1D-204ENST00000465887 2118 ntTSL 214.92□□□□□ -0.023e-9■■■■□ 25.7
CSTF2P33240 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.8□□□□□ -0.043e-9■■■■□ 25.7
CSTF2P33240 POLR1D-206ENST00000489647 1723 ntTSL 1 (best) BASIC10.1□□□□□ -0.793e-9■■■■□ 25.7
CSTF2P33240 ABT1-201ENST00000274849 2949 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.813e-9■■■■□ 25.7
CSTF2P33240 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.53□□□□□ -1.363e-9■■■■□ 25.7
CSTF2P33240 POLR1D-222ENST00000637389 129 ntTSL 50.57□□□□□ -2.323e-9■■■■□ 25.7
CSTF2P33240 GPHN-211ENST00000556020 562 ntTSL 416.98■□□□□ 0.315e-7■■■■□ 25.7
CSTF2P33240 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.365e-7■■■■□ 25.7
Retrieved 100 of 6,735 protein–RNA pairs in 53.2 ms