RNA–Protein interactions for RNA: ENST00000468166.5

SND1-206, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-206ENST00000468166 NISCHQ9Y2I1 1504 aa18.32■□□□□ 0.52
SND1-206ENST00000468166 CCDC180Q9P1Z9 1646 aa16.11■□□□□ 0.17
SND1-206ENST00000468166 ZCCHC6Q5VYS8 1495 aaKnown RBP15.39■□□□□ 0.05
SND1-206ENST00000468166 CHIC1Q5VXU3 224 aa15.27■□□□□ 0.04
SND1-206ENST00000468166 AEBP2Q6ZN18 517 aaPredicted RBP15.22■□□□□ 0.03
SND1-206ENST00000468166 ABCC9O60706 1549 aa15.21■□□□□ 0.03
SND1-206ENST00000468166 DCAF1Q9Y4B6 1507 aa15.17■□□□□ 0.02
SND1-206ENST00000468166 DCAF8L2P0C7V8 631 aa15.08■□□□□ 0
SND1-206ENST00000468166 MYO15BQ96JP2 1530 aa15.02□□□□□ -0.01
SND1-206ENST00000468166 NACADO15069 1562 aa14.97□□□□□ -0.01
SND1-206ENST00000468166 RB1CC1Q8TDY2 1594 aa14.87□□□□□ -0.03
SND1-206ENST00000468166 SHROOM4Q9ULL8 1493 aa14.84□□□□□ -0.03
SND1-206ENST00000468166 SCRIBQ14160 1630 aa14.75□□□□□ -0.05
SND1-206ENST00000468166 UNC13AQ9UPW8 1703 aa14.61□□□□□ -0.07
SND1-206ENST00000468166 BICRAQ9NZM4 1560 aa14.39□□□□□ -0.11
SND1-206ENST00000468166 PABPN1Q86U42 306 aaKnown RBP eCLIP14.26□□□□□ -0.13
SND1-206ENST00000468166 SUPT5HO00267 1087 aaKnown RBP14.21□□□□□ -0.13
SND1-206ENST00000468166 CECR2Q9BXF3 1484 aa14.2□□□□□ -0.14
SND1-206ENST00000468166 BAZ1AQ9NRL2 1556 aaPredicted RBP14.18□□□□□ -0.14
SND1-206ENST00000468166 SMARCA4P51532 1647 aa14.14□□□□□ -0.15
SND1-206ENST00000468166 RSF1Q96T23 1441 aaPredicted RBP14.14□□□□□ -0.15
SND1-206ENST00000468166 MROH2BQ7Z745 1585 aa14.13□□□□□ -0.15
SND1-206ENST00000468166 WIZO95785 1651 aa14.05□□□□□ -0.16
SND1-206ENST00000468166 EIF4G1Q04637 1599 aaKnown RBP13.97□□□□□ -0.17
SND1-206ENST00000468166 PEG3Q9GZU2 1588 aa13.96□□□□□ -0.18
SND1-206ENST00000468166 TOP2AP11388 1531 aaKnown RBP13.91□□□□□ -0.18
SND1-206ENST00000468166 SMARCA2P51531 1590 aa13.91□□□□□ -0.18
SND1-206ENST00000468166 ATAD2BQ9ULI0 1458 aa13.87□□□□□ -0.19
SND1-206ENST00000468166 BAZ1BQ9UIG0 1483 aaKnown RBP13.82□□□□□ -0.2
SND1-206ENST00000468166 HMGXB3Q12766 1538 aa13.8□□□□□ -0.2
SND1-206ENST00000468166 CC2D2AQ9P2K1 1620 aa13.79□□□□□ -0.2
SND1-206ENST00000468166 NCAPD3P42695 1498 aa13.76□□□□□ -0.21
SND1-206ENST00000468166 CCDC88BA6NC98 1476 aa13.72□□□□□ -0.21
SND1-206ENST00000468166 PRDM2Q13029 1718 aa13.5□□□□□ -0.25
SND1-206ENST00000468166 CFTRP13569 1480 aa13.44□□□□□ -0.26
SND1-206ENST00000468166 ABCC8Q09428 1581 aa13.43□□□□□ -0.26
SND1-206ENST00000468166 PHF23Q9BUL5 403 aaPredicted RBP13.41□□□□□ -0.26
SND1-206ENST00000468166 TRIM41Q8WV44 630 aa13.39□□□□□ -0.27
SND1-206ENST00000468166 DNAJC5BQ9UF47 199 aa13.39□□□□□ -0.27
SND1-206ENST00000468166 CADPSQ9ULU8 1353 aa13.39□□□□□ -0.27
SND1-206ENST00000468166 LAMC3Q9Y6N6 1575 aa13.37□□□□□ -0.27
SND1-206ENST00000468166 WRNQ14191 1432 aaPredicted RBP eCLIP13.34□□□□□ -0.27
SND1-206ENST00000468166 SYNJ1O43426 1573 aa13.32□□□□□ -0.28
SND1-206ENST00000468166 NESP48681 1621 aa13.31□□□□□ -0.28
SND1-206ENST00000468166 BIVM-ERCC5R4GMW8 1640 aa13.29□□□□□ -0.28
SND1-206ENST00000468166 TOP2BQ02880 1626 aa13.28□□□□□ -0.28
SND1-206ENST00000468166 FANCD2Q9BXW9 1451 aa13.28□□□□□ -0.28
SND1-206ENST00000468166 KIF21AQ7Z4S6 1674 aa13.24□□□□□ -0.29
SND1-206ENST00000468166 CUX1P39880 1505 aa13.23□□□□□ -0.29
SND1-206ENST00000468166 CEP164Q9UPV0 1460 aa13.23□□□□□ -0.29
SND1-206ENST00000468166 PDS5BQ9NTI5 1447 aa13.22□□□□□ -0.29
SND1-206ENST00000468166 DNMBPQ6XZF7 1577 aa13.18□□□□□ -0.3
SND1-206ENST00000468166 TOPBP1Q92547 1522 aa13.13□□□□□ -0.31
SND1-206ENST00000468166 EEA1Q15075 1411 aa13.13□□□□□ -0.31
SND1-206ENST00000468166 FAM9AQ8IZU1 332 aaPredicted RBP13.12□□□□□ -0.31
SND1-206ENST00000468166 SOGA1O94964 1423 aa13.12□□□□□ -0.31
SND1-206ENST00000468166 FGD5Q6ZNL6 1462 aa13.11□□□□□ -0.31
SND1-206ENST00000468166 URB2Q14146 1524 aaKnown RBP13.11□□□□□ -0.31
SND1-206ENST00000468166 MRC2Q9UBG0 1479 aa13.09□□□□□ -0.31
SND1-206ENST00000468166 ERCC6Q03468 1493 aa13.08□□□□□ -0.32
SND1-206ENST00000468166 RUSC2Q8N2Y8 1516 aa13.07□□□□□ -0.32
SND1-206ENST00000468166 POLA1P09884 1462 aaPredicted RBP13.05□□□□□ -0.32
SND1-206ENST00000468166 WDR62O43379 1518 aa13.03□□□□□ -0.32
SND1-206ENST00000468166 THOC2Q8NI27 1593 aaKnown RBP13.03□□□□□ -0.32
SND1-206ENST00000468166 WDR97A6NE52 1622 aa13.02□□□□□ -0.32
SND1-206ENST00000468166 KIF27Q86VH2 1401 aa13.02□□□□□ -0.33
SND1-206ENST00000468166 CUX2O14529 1486 aa13□□□□□ -0.33
SND1-206ENST00000468166 LOC105371045A0A1W2PR82 267 aa13□□□□□ -0.33
SND1-206ENST00000468166 KIF21BO75037 1637 aa12.99□□□□□ -0.33
SND1-206ENST00000468166 ABCA10Q8WWZ4 1543 aa12.99□□□□□ -0.33
SND1-206ENST00000468166 CSRNP3Q8WYN3 585 aa12.99□□□□□ -0.33
SND1-206ENST00000468166 RAD54L2Q9Y4B4 1467 aa12.98□□□□□ -0.33
SND1-206ENST00000468166 TARBP1Q13395 1621 aaKnown RBP12.96□□□□□ -0.33
SND1-206ENST00000468166 SENP3Q9H4L4 574 aaPredicted RBP12.96□□□□□ -0.33
SND1-206ENST00000468166 GOLGA3Q08378 1498 aa12.94□□□□□ -0.34
SND1-206ENST00000468166 ABCA5Q8WWZ7 1642 aa12.94□□□□□ -0.34
SND1-206ENST00000468166 EHMT2Q96KQ7 1210 aa12.93□□□□□ -0.34
SND1-206ENST00000468166 ERICH3Q5RHP9 1530 aa12.91□□□□□ -0.34
SND1-206ENST00000468166 IFT140Q96RY7 1462 aa12.9□□□□□ -0.34
SND1-206ENST00000468166 PRXQ9BXM0 1461 aa12.9□□□□□ -0.34
SND1-206ENST00000468166 CUL7Q14999 1698 aa12.89□□□□□ -0.35
SND1-206ENST00000468166 PBRM1Q86U86 1689 aa12.89□□□□□ -0.35
SND1-206ENST00000468166 RAPGEF2Q9Y4G8 1499 aa12.87□□□□□ -0.35
SND1-206ENST00000468166 GAPVD1Q14C86 1478 aa12.86□□□□□ -0.35
SND1-206ENST00000468166 IGF1RP08069 1367 aa12.85□□□□□ -0.35
SND1-206ENST00000468166 TDRD9Q8NDG6 1382 aaKnown RBP12.84□□□□□ -0.35
SND1-206ENST00000468166 TNIKQ9UKE5 1360 aa12.84□□□□□ -0.35
SND1-206ENST00000468166 EIF4G3O43432 1585 aaKnown RBP12.83□□□□□ -0.36
SND1-206ENST00000468166 UBTFP17480 764 aaKnown RBP12.83□□□□□ -0.36
SND1-206ENST00000468166 ZNF608Q9ULD9 1512 aaPredicted RBP12.81□□□□□ -0.36
SND1-206ENST00000468166 CARMIL1Q5VZK9 1371 aa12.81□□□□□ -0.36
SND1-206ENST00000468166 CEP162Q5TB80 1403 aa12.79□□□□□ -0.36
SND1-206ENST00000468166 AQRO60306 1485 aaKnown RBP eCLIP12.79□□□□□ -0.36
SND1-206ENST00000468166 GRIN2BQ13224 1484 aa12.78□□□□□ -0.36
SND1-206ENST00000468166 ADAMTS12P58397 1594 aa12.77□□□□□ -0.36
SND1-206ENST00000468166 CTTNBP2Q8WZ74 1663 aa12.76□□□□□ -0.37
SND1-206ENST00000468166 FHAD1B1AJZ9 1412 aa12.72□□□□□ -0.37
SND1-206ENST00000468166 SNAPC4Q5SXM2 1469 aa12.72□□□□□ -0.37
SND1-206ENST00000468166 CLIP1P30622 1438 aa12.71□□□□□ -0.37
SND1-206ENST00000468166 MAGI1Q96QZ7 1491 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms