RNA–Protein interactions for RNA: ENST00000637015.1

ARID1B-223, Transcript of AT-rich interaction domain 1B, humanhuman

APPRIS ALT2 TSL 5

Gene ARID1B, Length 5,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1B-223ENST00000637015 DCAF8L2P0C7V8 631 aa21.12■□□□□ 0.97
ARID1B-223ENST00000637015 SUPT5HO00267 1087 aaKnown RBP19.86■□□□□ 0.77
ARID1B-223ENST00000637015 NISCHQ9Y2I1 1504 aa19.77■□□□□ 0.76
ARID1B-223ENST00000637015 PELP1Q8IZL8 1130 aaKnown RBP19.75■□□□□ 0.75
ARID1B-223ENST00000637015 FAM9AQ8IZU1 332 aaPredicted RBP19.6■□□□□ 0.73
ARID1B-223ENST00000637015 APLP2Q06481 763 aa19.53■□□□□ 0.72
ARID1B-223ENST00000637015 SHROOM4Q9ULL8 1493 aa19.34■□□□□ 0.69
ARID1B-223ENST00000637015 EHMT2Q96KQ7 1210 aa19.11■□□□□ 0.65
ARID1B-223ENST00000637015 CCER1Q8TC90 406 aaPredicted RBP18.86■□□□□ 0.61
ARID1B-223ENST00000637015 ZEB1P37275 1124 aaPredicted RBP18.74■□□□□ 0.59
ARID1B-223ENST00000637015 ERICH6Q7L0X2 663 aa18.7■□□□□ 0.58
ARID1B-223ENST00000637015 CENPBP07199 599 aaPredicted RBP18.69■□□□□ 0.58
ARID1B-223ENST00000637015 TRIM41Q8WV44 630 aa18.59■□□□□ 0.57
ARID1B-223ENST00000637015 ATP1B4Q9UN42 357 aaPredicted RBP18.57■□□□□ 0.56
ARID1B-223ENST00000637015 PCGF6Q9BYE7 350 aa18.53■□□□□ 0.56
ARID1B-223ENST00000637015 TTBK1Q5TCY1 1321 aaPredicted RBP18.53■□□□□ 0.56
ARID1B-223ENST00000637015 RANGAP1P46060 587 aaPredicted RBP18.46■□□□□ 0.55
ARID1B-223ENST00000637015 UBTFP17480 764 aaKnown RBP18.46■□□□□ 0.55
ARID1B-223ENST00000637015 NEFLP07196 543 aa18.43■□□□□ 0.54
ARID1B-223ENST00000637015 MYT1Q01538 1121 aa18.12■□□□□ 0.49
ARID1B-223ENST00000637015 MYT1LQ9UL68 1186 aa18.1■□□□□ 0.49
ARID1B-223ENST00000637015 DAXXQ9UER7 740 aaPredicted RBP18.02■□□□□ 0.48
ARID1B-223ENST00000637015 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.01■□□□□ 0.47
ARID1B-223ENST00000637015 HNRNPUL2Q1KMD3 747 aaKnown RBP18.01■□□□□ 0.47
ARID1B-223ENST00000637015 TRIM26Q12899 539 aaPredicted RBP17.89■□□□□ 0.45
ARID1B-223ENST00000637015 YTHDC1Q96MU7 727 aaKnown RBP17.89■□□□□ 0.45
ARID1B-223ENST00000637015 POLR3GLQ9BT43 218 aa17.79■□□□□ 0.44
ARID1B-223ENST00000637015 ITGAEP38570 1179 aa17.74■□□□□ 0.43
ARID1B-223ENST00000637015 PPARGC1BQ86YN6 1023 aaKnown RBP17.63■□□□□ 0.41
ARID1B-223ENST00000637015 SLC4A1APQ9BWU0 796 aaKnown RBP17.63■□□□□ 0.41
ARID1B-223ENST00000637015 ZNF316A6NFI3 1004 aaPredicted RBP17.53■□□□□ 0.4
ARID1B-223ENST00000637015 HRCP23327 699 aa17.52■□□□□ 0.39
ARID1B-223ENST00000637015 CLSPNQ9HAW4 1339 aa17.51■□□□□ 0.39
ARID1B-223ENST00000637015 CHIC1Q5VXU3 224 aa17.5■□□□□ 0.39
ARID1B-223ENST00000637015 RTL5Q5HYW3 569 aaPredicted RBP17.45■□□□□ 0.38
ARID1B-223ENST00000637015 FAM50AQ14320 339 aaKnown RBP17.41■□□□□ 0.38
ARID1B-223ENST00000637015 TRIM52Q96A61 297 aa17.41■□□□□ 0.38
ARID1B-223ENST00000637015 ZBTB47Q9UFB7 747 aaPredicted RBP17.41■□□□□ 0.38
ARID1B-223ENST00000637015 CNGB1Q14028 1251 aaPredicted RBP17.37■□□□□ 0.37
ARID1B-223ENST00000637015 NEFMP07197 916 aa17.29■□□□□ 0.36
ARID1B-223ENST00000637015 LOC105371045A0A1W2PR82 267 aa17.27■□□□□ 0.36
ARID1B-223ENST00000637015 DIEXFQ68CQ4 756 aaKnown RBP17.23■□□□□ 0.35
ARID1B-223ENST00000637015 ANP32CO43423 234 aa17.22■□□□□ 0.35
ARID1B-223ENST00000637015 ABCC9O60706 1549 aa17.17■□□□□ 0.34
ARID1B-223ENST00000637015 FBLN2P98095 1184 aa17.15■□□□□ 0.34
ARID1B-223ENST00000637015 NEUROD1Q13562 356 aa17.15■□□□□ 0.34
ARID1B-223ENST00000637015 PABPN1Q86U42 306 aaKnown RBP eCLIP17.15■□□□□ 0.34
ARID1B-223ENST00000637015 CDK11AQ9UQ88 783 aaPredicted RBP17.13■□□□□ 0.33
ARID1B-223ENST00000637015 CANXP27824 592 aaKnown RBP17.13■□□□□ 0.33
ARID1B-223ENST00000637015 ZNF326Q5BKZ1 582 aaKnown RBP17.12■□□□□ 0.33
ARID1B-223ENST00000637015 BCANQ96GW7 911 aa17.11■□□□□ 0.33
ARID1B-223ENST00000637015 ESF1Q9H501 851 aaKnown RBP17.07■□□□□ 0.32
ARID1B-223ENST00000637015 SLC24A1O60721 1099 aa17.05■□□□□ 0.32
ARID1B-223ENST00000637015 NPM1P06748 294 aaKnown RBP eCLIP16.92■□□□□ 0.3
ARID1B-223ENST00000637015 CSRNP3Q8WYN3 585 aa16.88■□□□□ 0.29
ARID1B-223ENST00000637015 STAG3Q9UJ98 1225 aa16.88■□□□□ 0.29
ARID1B-223ENST00000637015 ZNF777Q9ULD5 760 aaPredicted RBP16.86■□□□□ 0.29
ARID1B-223ENST00000637015 ANP32AP39687 249 aaKnown RBP16.85■□□□□ 0.29
ARID1B-223ENST00000637015 ANP32BQ92688 251 aaKnown RBP16.81■□□□□ 0.28
ARID1B-223ENST00000637015 P3H3Q8IVL6 736 aa16.78■□□□□ 0.28
ARID1B-223ENST00000637015 UPF2Q9HAU5 1272 aaKnown RBP16.77■□□□□ 0.28
ARID1B-223ENST00000637015 TONSLQ96HA7 1378 aa16.76■□□□□ 0.27
ARID1B-223ENST00000637015 CHGAP10645 457 aaKnown RBP16.72■□□□□ 0.27
ARID1B-223ENST00000637015 BCL11AQ9H165 835 aa16.72■□□□□ 0.27
ARID1B-223ENST00000637015 ARID3CA6NKF2 412 aa16.72■□□□□ 0.27
ARID1B-223ENST00000637015 HSP90AA1P07900 732 aaKnown RBP16.7■□□□□ 0.26
ARID1B-223ENST00000637015 GTF3C3Q9Y5Q9 886 aa16.69■□□□□ 0.26
ARID1B-223ENST00000637015 ACIN1Q9UKV3 1341 aaKnown RBP16.69■□□□□ 0.26
ARID1B-223ENST00000637015 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.69■□□□□ 0.26
ARID1B-223ENST00000637015 TSPY4P0CV99 314 aa16.62■□□□□ 0.25
ARID1B-223ENST00000637015 TSPY10P0CW01 314 aa16.62■□□□□ 0.25
ARID1B-223ENST00000637015 WDR43Q15061 677 aaKnown RBP eCLIP16.56■□□□□ 0.24
ARID1B-223ENST00000637015 SCRIBQ14160 1630 aa16.56■□□□□ 0.24
ARID1B-223ENST00000637015 NPM2Q86SE8 214 aaKnown RBP16.55■□□□□ 0.24
ARID1B-223ENST00000637015 MYH16Q9H6N6 1097 aa16.53■□□□□ 0.24
ARID1B-223ENST00000637015 TMC1Q8TDI8 760 aa16.52■□□□□ 0.23
ARID1B-223ENST00000637015 HNRNPUQ00839 825 aaKnown RBP eCLIP16.48■□□□□ 0.23
ARID1B-223ENST00000637015 CDK11BP21127 795 aaKnown RBP16.48■□□□□ 0.23
ARID1B-223ENST00000637015 MTUS2Q5JR59 1369 aa16.48■□□□□ 0.23
ARID1B-223ENST00000637015 CHMP7Q8WUX9 453 aaPredicted RBP16.48■□□□□ 0.23
ARID1B-223ENST00000637015 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.48■□□□□ 0.231e-6■■□□□ 12.8
ARID1B-223ENST00000637015 PLPPR3Q6T4P5 718 aa16.47■□□□□ 0.23
ARID1B-223ENST00000637015 EIF5BO60841 1220 aaKnown RBP16.45■□□□□ 0.22
ARID1B-223ENST00000637015 FAM9BQ8IZU0 186 aa16.43■□□□□ 0.22
ARID1B-223ENST00000637015 RSF1Q96T23 1441 aaPredicted RBP16.42■□□□□ 0.22
ARID1B-223ENST00000637015 PPP1R15AO75807 674 aaPredicted RBP16.41■□□□□ 0.22
ARID1B-223ENST00000637015 CCDC136Q96JN2 1154 aa16.41■□□□□ 0.22
ARID1B-223ENST00000637015 FKBP8Q14318 412 aa16.4■□□□□ 0.22
ARID1B-223ENST00000637015 SCAF1Q9H7N4 1312 aaKnown RBP16.39■□□□□ 0.21
ARID1B-223ENST00000637015 CDCA8Q53HL2 280 aa16.39■□□□□ 0.21
ARID1B-223ENST00000637015 CHIC2Q9UKJ5 165 aa16.38■□□□□ 0.21
ARID1B-223ENST00000637015 GLIPR1L2Q4G1C9 344 aa16.36■□□□□ 0.21
ARID1B-223ENST00000637015 DDX10Q13206 875 aaKnown RBP16.36■□□□□ 0.21
ARID1B-223ENST00000637015 DCAF1Q9Y4B6 1507 aa16.35■□□□□ 0.21
ARID1B-223ENST00000637015 PLEKHD1A6NEE1 506 aa16.34■□□□□ 0.21
ARID1B-223ENST00000637015 MRS2Q9HD23 443 aa16.34■□□□□ 0.21
ARID1B-223ENST00000637015 CFAP53Q96M91 514 aa16.34■□□□□ 0.21
ARID1B-223ENST00000637015 ANP32EQ9BTT0 268 aa16.34■□□□□ 0.21
ARID1B-223ENST00000637015 EEA1Q15075 1411 aa16.33■□□□□ 0.2
ARID1B-223ENST00000637015 EIF4G2P78344 907 aaKnown RBP eCLIP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms