RNA–Protein interactions for RNA: ENST00000541973.5

RAB6A-209, Transcript of RAB6A, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB6A, Length 1,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6A-209ENST00000541973 AEBP2Q6ZN18 517 aaPredicted RBP28.02■■■□□ 2.08
RAB6A-209ENST00000541973 CHIC1Q5VXU3 224 aa26.61■■□□□ 1.85
RAB6A-209ENST00000541973 SENP3Q9H4L4 574 aaPredicted RBP23.86■■□□□ 1.41
RAB6A-209ENST00000541973 PHF23Q9BUL5 403 aaPredicted RBP23.55■■□□□ 1.36
RAB6A-209ENST00000541973 FOXD1Q16676 465 aa22.26■■□□□ 1.15
RAB6A-209ENST00000541973 NISCHQ9Y2I1 1504 aa22.22■■□□□ 1.15
RAB6A-209ENST00000541973 PLPPR3Q6T4P5 718 aa21.23■□□□□ 0.99
RAB6A-209ENST00000541973 POTEDQ86YR6 584 aa21.23■□□□□ 0.99
RAB6A-209ENST00000541973 PPP6R1Q9UPN7 881 aa20.83■□□□□ 0.93
RAB6A-209ENST00000541973 MSH5O43196 834 aa20.8■□□□□ 0.92
RAB6A-209ENST00000541973 PIAS4Q8N2W9 510 aaPredicted RBP20.74■□□□□ 0.91
RAB6A-209ENST00000541973 ADRA2BP18089 450 aa20.72■□□□□ 0.91
RAB6A-209ENST00000541973 CCDC180Q9P1Z9 1646 aa19.68■□□□□ 0.74
RAB6A-209ENST00000541973 MAPK8IP2Q13387 824 aaPredicted RBP19.04■□□□□ 0.64
RAB6A-209ENST00000541973 DMRT2Q9Y5R5 561 aa18.95■□□□□ 0.62
RAB6A-209ENST00000541973 ABCC9O60706 1549 aa18.94■□□□□ 0.62
RAB6A-209ENST00000541973 SCAF1Q9H7N4 1312 aaKnown RBP18.93■□□□□ 0.62
RAB6A-209ENST00000541973 PPP4R3CPQ6ZMV5 832 aa18.61■□□□□ 0.57
RAB6A-209ENST00000541973 ZCCHC6Q5VYS8 1495 aaKnown RBP18.55■□□□□ 0.56
RAB6A-209ENST00000541973 DCAF8L2P0C7V8 631 aa18.47■□□□□ 0.55
RAB6A-209ENST00000541973 NACADO15069 1562 aa18.46■□□□□ 0.55
RAB6A-209ENST00000541973 MYO15BQ96JP2 1530 aa18.45■□□□□ 0.54
RAB6A-209ENST00000541973 DCAF1Q9Y4B6 1507 aa18.44■□□□□ 0.54
RAB6A-209ENST00000541973 RB1CC1Q8TDY2 1594 aa18.41■□□□□ 0.54
RAB6A-209ENST00000541973 HOXD11P31277 338 aaPredicted RBP18.28■□□□□ 0.52
RAB6A-209ENST00000541973 CNKSR2Q8WXI2 1034 aa18.26■□□□□ 0.51
RAB6A-209ENST00000541973 RNF216Q9NWF9 866 aaPredicted RBP18.12■□□□□ 0.49
RAB6A-209ENST00000541973 DCAF8L1A6NGE4 600 aa18.03■□□□□ 0.48
RAB6A-209ENST00000541973 CACNB1Q02641 598 aaPredicted RBP17.96■□□□□ 0.47
RAB6A-209ENST00000541973 UNC13AQ9UPW8 1703 aa17.93■□□□□ 0.46
RAB6A-209ENST00000541973 SCRIBQ14160 1630 aa17.9■□□□□ 0.46
RAB6A-209ENST00000541973 NCBP3Q53F19 620 aaKnown RBP17.86■□□□□ 0.45
RAB6A-209ENST00000541973 KCNA4P22459 653 aa17.83■□□□□ 0.44
RAB6A-209ENST00000541973 RNF39Q9H2S5 420 aa17.78■□□□□ 0.44
RAB6A-209ENST00000541973 BICRAQ9NZM4 1560 aa17.76■□□□□ 0.43
RAB6A-209ENST00000541973 PABPN1Q86U42 306 aaKnown RBP eCLIP17.74■□□□□ 0.43
RAB6A-209ENST00000541973 SHROOM4Q9ULL8 1493 aa17.71■□□□□ 0.43
RAB6A-209ENST00000541973 DNAJC5BQ9UF47 199 aa17.68■□□□□ 0.42
RAB6A-209ENST00000541973 NPM3O75607 178 aaKnown RBP17.66■□□□□ 0.42
RAB6A-209ENST00000541973 C1QBPQ07021 282 aaKnown RBP17.51■□□□□ 0.39
RAB6A-209ENST00000541973 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.31■□□□□ 0.36
RAB6A-209ENST00000541973 EIF4G1Q04637 1599 aaKnown RBP17.31■□□□□ 0.36
RAB6A-209ENST00000541973 BAZ1AQ9NRL2 1556 aaPredicted RBP17.23■□□□□ 0.35
RAB6A-209ENST00000541973 EHMT2Q96KQ7 1210 aa17.23■□□□□ 0.35
RAB6A-209ENST00000541973 CECR2Q9BXF3 1484 aa17.22■□□□□ 0.35
RAB6A-209ENST00000541973 SMARCA4P51532 1647 aa17.18■□□□□ 0.34
RAB6A-209ENST00000541973 CC2D2AQ9P2K1 1620 aa17.17■□□□□ 0.34
RAB6A-209ENST00000541973 MROH2BQ7Z745 1585 aa17.08■□□□□ 0.32
RAB6A-209ENST00000541973 SMARCA2P51531 1590 aa17.06■□□□□ 0.32
RAB6A-209ENST00000541973 SLC4A1APQ9BWU0 796 aaKnown RBP17.05■□□□□ 0.32
RAB6A-209ENST00000541973 PEG3Q9GZU2 1588 aa17.04■□□□□ 0.32
RAB6A-209ENST00000541973 U3KPZ7 1027 aaPredicted RBP17.03■□□□□ 0.32
RAB6A-209ENST00000541973 ATAD2BQ9ULI0 1458 aa17.03■□□□□ 0.32
RAB6A-209ENST00000541973 NCAPD3P42695 1498 aa17.01■□□□□ 0.31
RAB6A-209ENST00000541973 RSF1Q96T23 1441 aaPredicted RBP17.01■□□□□ 0.31
RAB6A-209ENST00000541973 HMGXB3Q12766 1538 aa16.95■□□□□ 0.3
RAB6A-209ENST00000541973 BAZ1BQ9UIG0 1483 aaKnown RBP16.92■□□□□ 0.3
RAB6A-209ENST00000541973 WIZO95785 1651 aa16.91■□□□□ 0.3
RAB6A-209ENST00000541973 SLC4A2P04920 1241 aa16.89■□□□□ 0.29
RAB6A-209ENST00000541973 CSRNP3Q8WYN3 585 aa16.81■□□□□ 0.28
RAB6A-209ENST00000541973 TOP2AP11388 1531 aaKnown RBP16.79■□□□□ 0.28
RAB6A-209ENST00000541973 SUPT5HO00267 1087 aaKnown RBP16.76■□□□□ 0.27
RAB6A-209ENST00000541973 SPINK5Q9NQ38 1064 aaPredicted RBP16.75■□□□□ 0.27
RAB6A-209ENST00000541973 CAPN15O75808 1086 aa16.66■□□□□ 0.26
RAB6A-209ENST00000541973 DSG3P32926 999 aa16.64■□□□□ 0.25
RAB6A-209ENST00000541973 CCDC88BA6NC98 1476 aa16.58■□□□□ 0.24
RAB6A-209ENST00000541973 LAMC3Q9Y6N6 1575 aa16.53■□□□□ 0.24
RAB6A-209ENST00000541973 CADPSQ9ULU8 1353 aa16.52■□□□□ 0.24
RAB6A-209ENST00000541973 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.49■□□□□ 0.23
RAB6A-209ENST00000541973 HNRNPUL2Q1KMD3 747 aaKnown RBP16.49■□□□□ 0.23
RAB6A-209ENST00000541973 APLP2Q06481 763 aa16.48■□□□□ 0.23
RAB6A-209ENST00000541973 POTEHQ6S545 545 aa16.47■□□□□ 0.23
RAB6A-209ENST00000541973 CFTRP13569 1480 aa16.47■□□□□ 0.23
RAB6A-209ENST00000541973 ZBTB22O15209 634 aa16.44■□□□□ 0.22
RAB6A-209ENST00000541973 NESP48681 1621 aa16.44■□□□□ 0.22
RAB6A-209ENST00000541973 PDS5BQ9NTI5 1447 aa16.43■□□□□ 0.22
RAB6A-209ENST00000541973 SAMD1Q6SPF0 538 aaPredicted RBP16.41■□□□□ 0.22
RAB6A-209ENST00000541973 ZNF219Q9P2Y4 722 aaPredicted RBP16.41■□□□□ 0.22
RAB6A-209ENST00000541973 TRHP20396 242 aaPredicted RBP16.39■□□□□ 0.21
RAB6A-209ENST00000541973 PRDM2Q13029 1718 aa16.39■□□□□ 0.21
RAB6A-209ENST00000541973 ERCC6Q03468 1493 aa16.35■□□□□ 0.21
RAB6A-209ENST00000541973 MYCNP04198 464 aaPredicted RBP16.32■□□□□ 0.2
RAB6A-209ENST00000541973 FANCD2Q9BXW9 1451 aa16.31■□□□□ 0.2
RAB6A-209ENST00000541973 ABCB7O75027 752 aa16.29■□□□□ 0.2
RAB6A-209ENST00000541973 CEP164Q9UPV0 1460 aa16.29■□□□□ 0.2
RAB6A-209ENST00000541973 KIF21AQ7Z4S6 1674 aa16.28■□□□□ 0.2
RAB6A-209ENST00000541973 FOXD4L1Q9NU39 408 aa16.24■□□□□ 0.19
RAB6A-209ENST00000541973 MRC2Q9UBG0 1479 aa16.2■□□□□ 0.18
RAB6A-209ENST00000541973 ABCC8Q09428 1581 aa16.18■□□□□ 0.18
RAB6A-209ENST00000541973 THOC2Q8NI27 1593 aaKnown RBP16.17■□□□□ 0.18
RAB6A-209ENST00000541973 WDR62O43379 1518 aa16.13■□□□□ 0.17
RAB6A-209ENST00000541973 CUX2O14529 1486 aa16.11■□□□□ 0.17
RAB6A-209ENST00000541973 URB2Q14146 1524 aaKnown RBP16.1■□□□□ 0.17
RAB6A-209ENST00000541973 DNMBPQ6XZF7 1577 aa16.09■□□□□ 0.17
RAB6A-209ENST00000541973 TOPBP1Q92547 1522 aa16.07■□□□□ 0.16
RAB6A-209ENST00000541973 WRNQ14191 1432 aaPredicted RBP eCLIP16.05■□□□□ 0.16
RAB6A-209ENST00000541973 CUX1P39880 1505 aa16.02■□□□□ 0.15
RAB6A-209ENST00000541973 TOP2BQ02880 1626 aa15.99■□□□□ 0.15
RAB6A-209ENST00000541973 POLA2Q14181 598 aa15.99■□□□□ 0.15
RAB6A-209ENST00000541973 BIVM-ERCC5R4GMW8 1640 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms