RNA–Protein interactions for RNA: ENST00000637810.1

ARID1B-230, Transcript of AT-rich interaction domain 1B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARID1B, Length 5,073 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1B-230ENST00000637810 NISCHQ9Y2I1 1504 aa20.12■□□□□ 0.81
ARID1B-230ENST00000637810 DCAF8L2P0C7V8 631 aa19.75■□□□□ 0.75
ARID1B-230ENST00000637810 SUPT5HO00267 1087 aaKnown RBP18.81■□□□□ 0.6
ARID1B-230ENST00000637810 SHROOM4Q9ULL8 1493 aa18.62■□□□□ 0.57
ARID1B-230ENST00000637810 APLP2Q06481 763 aa17.86■□□□□ 0.45
ARID1B-230ENST00000637810 EHMT2Q96KQ7 1210 aa17.79■□□□□ 0.44
ARID1B-230ENST00000637810 FAM9AQ8IZU1 332 aaPredicted RBP17.68■□□□□ 0.42
ARID1B-230ENST00000637810 TRIM41Q8WV44 630 aa17.62■□□□□ 0.41
ARID1B-230ENST00000637810 PELP1Q8IZL8 1130 aaKnown RBP17.43■□□□□ 0.38
ARID1B-230ENST00000637810 ZEB1P37275 1124 aaPredicted RBP17.39■□□□□ 0.37
ARID1B-230ENST00000637810 PCGF6Q9BYE7 350 aa17.38■□□□□ 0.37
ARID1B-230ENST00000637810 UBTFP17480 764 aaKnown RBP17.28■□□□□ 0.36
ARID1B-230ENST00000637810 TTBK1Q5TCY1 1321 aaPredicted RBP17.21■□□□□ 0.35
ARID1B-230ENST00000637810 RANGAP1P46060 587 aaPredicted RBP17.17■□□□□ 0.34
ARID1B-230ENST00000637810 CCER1Q8TC90 406 aaPredicted RBP17.13■□□□□ 0.33
ARID1B-230ENST00000637810 ATP1B4Q9UN42 357 aaPredicted RBP17.09■□□□□ 0.33
ARID1B-230ENST00000637810 CHIC1Q5VXU3 224 aa17.01■□□□□ 0.31
ARID1B-230ENST00000637810 ABCC9O60706 1549 aa17.01■□□□□ 0.31
ARID1B-230ENST00000637810 CENPBP07199 599 aaPredicted RBP16.99■□□□□ 0.31
ARID1B-230ENST00000637810 TRIM26Q12899 539 aaPredicted RBP16.98■□□□□ 0.31
ARID1B-230ENST00000637810 CCDC180Q9P1Z9 1646 aa16.77■□□□□ 0.28
ARID1B-230ENST00000637810 LOC105371045A0A1W2PR82 267 aa16.73■□□□□ 0.27
ARID1B-230ENST00000637810 ZCCHC6Q5VYS8 1495 aaKnown RBP16.73■□□□□ 0.27
ARID1B-230ENST00000637810 PABPN1Q86U42 306 aaKnown RBP eCLIP16.71■□□□□ 0.27
ARID1B-230ENST00000637810 PPARGC1BQ86YN6 1023 aaKnown RBP16.69■□□□□ 0.26
ARID1B-230ENST00000637810 HRCP23327 699 aa16.65■□□□□ 0.26
ARID1B-230ENST00000637810 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.6■□□□□ 0.25
ARID1B-230ENST00000637810 HNRNPUL2Q1KMD3 747 aaKnown RBP16.6■□□□□ 0.25
ARID1B-230ENST00000637810 NEFLP07196 543 aa16.58■□□□□ 0.25
ARID1B-230ENST00000637810 ITGAEP38570 1179 aa16.52■□□□□ 0.23
ARID1B-230ENST00000637810 ERICH6Q7L0X2 663 aa16.47■□□□□ 0.23
ARID1B-230ENST00000637810 SCRIBQ14160 1630 aa16.46■□□□□ 0.23
ARID1B-230ENST00000637810 YTHDC1Q96MU7 727 aaKnown RBP16.42■□□□□ 0.22
ARID1B-230ENST00000637810 MYT1LQ9UL68 1186 aa16.42■□□□□ 0.22
ARID1B-230ENST00000637810 CSRNP3Q8WYN3 585 aa16.31■□□□□ 0.2
ARID1B-230ENST00000637810 FAM50AQ14320 339 aaKnown RBP16.29■□□□□ 0.2
ARID1B-230ENST00000637810 RB1CC1Q8TDY2 1594 aa16.29■□□□□ 0.2
ARID1B-230ENST00000637810 MYT1Q01538 1121 aa16.23■□□□□ 0.19
ARID1B-230ENST00000637810 NACADO15069 1562 aa16.21■□□□□ 0.19
ARID1B-230ENST00000637810 POLR3GLQ9BT43 218 aa16.2■□□□□ 0.18
ARID1B-230ENST00000637810 TRIM52Q96A61 297 aa16.15■□□□□ 0.18
ARID1B-230ENST00000637810 DIEXFQ68CQ4 756 aaKnown RBP16.15■□□□□ 0.18
ARID1B-230ENST00000637810 DCAF1Q9Y4B6 1507 aa16.13■□□□□ 0.17
ARID1B-230ENST00000637810 FBLN2P98095 1184 aa16.07■□□□□ 0.16
ARID1B-230ENST00000637810 CDK11AQ9UQ88 783 aaPredicted RBP16.04■□□□□ 0.16
ARID1B-230ENST00000637810 NEUROD1Q13562 356 aa16.01■□□□□ 0.15
ARID1B-230ENST00000637810 RSF1Q96T23 1441 aaPredicted RBP16.01■□□□□ 0.15
ARID1B-230ENST00000637810 EEA1Q15075 1411 aa15.97■□□□□ 0.15
ARID1B-230ENST00000637810 DAXXQ9UER7 740 aaPredicted RBP15.96■□□□□ 0.14
ARID1B-230ENST00000637810 P3H3Q8IVL6 736 aa15.95■□□□□ 0.14
ARID1B-230ENST00000637810 ZNF316A6NFI3 1004 aaPredicted RBP15.94■□□□□ 0.14
ARID1B-230ENST00000637810 ANP32CO43423 234 aa15.92■□□□□ 0.14
ARID1B-230ENST00000637810 SLC4A1APQ9BWU0 796 aaKnown RBP15.91■□□□□ 0.14
ARID1B-230ENST00000637810 CNGB1Q14028 1251 aaPredicted RBP15.88■□□□□ 0.13
ARID1B-230ENST00000637810 BAZ1AQ9NRL2 1556 aaPredicted RBP15.87■□□□□ 0.13
ARID1B-230ENST00000637810 BAZ1BQ9UIG0 1483 aaKnown RBP15.86■□□□□ 0.13
ARID1B-230ENST00000637810 ZNF326Q5BKZ1 582 aaKnown RBP15.82■□□□□ 0.12
ARID1B-230ENST00000637810 GOLGA3Q08378 1498 aa15.8■□□□□ 0.12
ARID1B-230ENST00000637810 CLIP1P30622 1438 aa15.79■□□□□ 0.12
ARID1B-230ENST00000637810 WRNQ14191 1432 aaPredicted RBP eCLIP15.78■□□□□ 0.12
ARID1B-230ENST00000637810 ZNF777Q9ULD5 760 aaPredicted RBP15.78■□□□□ 0.12
ARID1B-230ENST00000637810 ARID3CA6NKF2 412 aa15.76■□□□□ 0.11
ARID1B-230ENST00000637810 TONSLQ96HA7 1378 aa15.73■□□□□ 0.11
ARID1B-230ENST00000637810 ACIN1Q9UKV3 1341 aaKnown RBP15.7■□□□□ 0.1
ARID1B-230ENST00000637810 MYO15BQ96JP2 1530 aa15.7■□□□□ 0.1
ARID1B-230ENST00000637810 KIF27Q86VH2 1401 aa15.7■□□□□ 0.1
ARID1B-230ENST00000637810 MTUS2Q5JR59 1369 aa15.69■□□□□ 0.1
ARID1B-230ENST00000637810 NPM1P06748 294 aaKnown RBP eCLIP15.68■□□□□ 0.1
ARID1B-230ENST00000637810 CEP164Q9UPV0 1460 aa15.68■□□□□ 0.1
ARID1B-230ENST00000637810 CEP162Q5TB80 1403 aa15.67■□□□□ 0.1
ARID1B-230ENST00000637810 TNIKQ9UKE5 1360 aa15.67■□□□□ 0.1
ARID1B-230ENST00000637810 CLSPNQ9HAW4 1339 aa15.67■□□□□ 0.1
ARID1B-230ENST00000637810 CHMP7Q8WUX9 453 aaPredicted RBP15.66■□□□□ 0.1
ARID1B-230ENST00000637810 CECR2Q9BXF3 1484 aa15.61■□□□□ 0.09
ARID1B-230ENST00000637810 GTF3C3Q9Y5Q9 886 aa15.6■□□□□ 0.09
ARID1B-230ENST00000637810 NEFMP07197 916 aa15.6■□□□□ 0.09
ARID1B-230ENST00000637810 TSPY4P0CV99 314 aa15.59■□□□□ 0.09
ARID1B-230ENST00000637810 TSPY10P0CW01 314 aa15.59■□□□□ 0.09
ARID1B-230ENST00000637810 ESF1Q9H501 851 aaKnown RBP15.56■□□□□ 0.08
ARID1B-230ENST00000637810 RTL5Q5HYW3 569 aaPredicted RBP15.55■□□□□ 0.08
ARID1B-230ENST00000637810 SMARCA2P51531 1590 aa15.54■□□□□ 0.08
ARID1B-230ENST00000637810 BCANQ96GW7 911 aa15.53■□□□□ 0.08
ARID1B-230ENST00000637810 ZBTB47Q9UFB7 747 aaPredicted RBP15.52■□□□□ 0.08
ARID1B-230ENST00000637810 CHIC2Q9UKJ5 165 aa15.51■□□□□ 0.07
ARID1B-230ENST00000637810 CANXP27824 592 aaKnown RBP15.49■□□□□ 0.07
ARID1B-230ENST00000637810 MROH2BQ7Z745 1585 aa15.49■□□□□ 0.07
ARID1B-230ENST00000637810 PLEKHD1A6NEE1 506 aa15.47■□□□□ 0.07
ARID1B-230ENST00000637810 STAG3Q9UJ98 1225 aa15.45■□□□□ 0.06
ARID1B-230ENST00000637810 FHAD1B1AJZ9 1412 aa15.45■□□□□ 0.06
ARID1B-230ENST00000637810 CCDC88BA6NC98 1476 aa15.44■□□□□ 0.06
ARID1B-230ENST00000637810 CHGAP10645 457 aaKnown RBP15.43■□□□□ 0.06
ARID1B-230ENST00000637810 TOP2AP11388 1531 aaKnown RBP15.42■□□□□ 0.06
ARID1B-230ENST00000637810 ERCC6Q03468 1493 aa15.41■□□□□ 0.06
ARID1B-230ENST00000637810 DDX10Q13206 875 aaKnown RBP15.4■□□□□ 0.06
ARID1B-230ENST00000637810 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.4■□□□□ 0.061e-6■■□□□ 12.8
ARID1B-230ENST00000637810 CARMIL1Q5VZK9 1371 aa15.38■□□□□ 0.05
ARID1B-230ENST00000637810 CUX2O14529 1486 aa15.38■□□□□ 0.05
ARID1B-230ENST00000637810 EIF4G2P78344 907 aaKnown RBP eCLIP15.36■□□□□ 0.05
ARID1B-230ENST00000637810 RRP7BPQ9NSQ0 103 aa15.34■□□□□ 0.05
ARID1B-230ENST00000637810 CFDP1Q9UEE9 299 aaPredicted RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 261.6 ms