RNA–Protein interactions for RNA: ENST00000554691.5

PCNX1-207, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,204 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-207ENST00000554691 PELP1Q8IZL8 1130 aaKnown RBP10.85□□□□□ -0.67
PCNX1-207ENST00000554691 MYT1Q01538 1121 aa10.81□□□□□ -0.68
PCNX1-207ENST00000554691 NISCHQ9Y2I1 1504 aa10.4□□□□□ -0.74
PCNX1-207ENST00000554691 ZEB1P37275 1124 aaPredicted RBP10.23□□□□□ -0.77
PCNX1-207ENST00000554691 CENPBP07199 599 aaPredicted RBP10.14□□□□□ -0.79
PCNX1-207ENST00000554691 HRCP23327 699 aa10.11□□□□□ -0.79
PCNX1-207ENST00000554691 TTBK1Q5TCY1 1321 aaPredicted RBP10.04□□□□□ -0.8
PCNX1-207ENST00000554691 SUPT5HO00267 1087 aaKnown RBP10□□□□□ -0.81
PCNX1-207ENST00000554691 PCGF6Q9BYE7 350 aa9.99□□□□□ -0.81
PCNX1-207ENST00000554691 DCAF8L2P0C7V8 631 aa9.99□□□□□ -0.81
PCNX1-207ENST00000554691 CCER1Q8TC90 406 aaPredicted RBP9.83□□□□□ -0.84
PCNX1-207ENST00000554691 TRIM26Q12899 539 aaPredicted RBP9.77□□□□□ -0.84
PCNX1-207ENST00000554691 ERICH6Q7L0X2 663 aa9.73□□□□□ -0.85
PCNX1-207ENST00000554691 SHROOM4Q9ULL8 1493 aa9.67□□□□□ -0.86
PCNX1-207ENST00000554691 NEFLP07196 543 aa9.58□□□□□ -0.88
PCNX1-207ENST00000554691 CLSPNQ9HAW4 1339 aa9.55□□□□□ -0.88
PCNX1-207ENST00000554691 ACIN1Q9UKV3 1341 aaKnown RBP9.52□□□□□ -0.89
PCNX1-207ENST00000554691 PPARGC1BQ86YN6 1023 aaKnown RBP9.51□□□□□ -0.89
PCNX1-207ENST00000554691 APLP2Q06481 763 aa9.5□□□□□ -0.89
PCNX1-207ENST00000554691 CHIC1Q5VXU3 224 aa9.48□□□□□ -0.89
PCNX1-207ENST00000554691 GTF3C3Q9Y5Q9 886 aa9.46□□□□□ -0.9
PCNX1-207ENST00000554691 YTHDC1Q96MU7 727 aaKnown RBP9.45□□□□□ -0.9
PCNX1-207ENST00000554691 DIEXFQ68CQ4 756 aaKnown RBP9.44□□□□□ -0.9
PCNX1-207ENST00000554691 MYT1LQ9UL68 1186 aa9.43□□□□□ -0.9
PCNX1-207ENST00000554691 DCAF1Q9Y4B6 1507 aa9.42□□□□□ -0.9
PCNX1-207ENST00000554691 TRIM41Q8WV44 630 aa9.4□□□□□ -0.9
PCNX1-207ENST00000554691 SCAF1Q9H7N4 1312 aaKnown RBP9.34□□□□□ -0.91
PCNX1-207ENST00000554691 FAM9AQ8IZU1 332 aaPredicted RBP9.29□□□□□ -0.92
PCNX1-207ENST00000554691 RTL5Q5HYW3 569 aaPredicted RBP9.28□□□□□ -0.92
PCNX1-207ENST00000554691 ZNF316A6NFI3 1004 aaPredicted RBP9.23□□□□□ -0.93
PCNX1-207ENST00000554691 EHMT2Q96KQ7 1210 aa9.23□□□□□ -0.93
PCNX1-207ENST00000554691 LOC105371045A0A1W2PR82 267 aa9.2□□□□□ -0.94
PCNX1-207ENST00000554691 NEUROD1Q13562 356 aa9.19□□□□□ -0.94
PCNX1-207ENST00000554691 CCDC180Q9P1Z9 1646 aa9.18□□□□□ -0.94
PCNX1-207ENST00000554691 ANP32EQ9BTT0 268 aa9.17□□□□□ -0.94
PCNX1-207ENST00000554691 CDK11AQ9UQ88 783 aaPredicted RBP9.14□□□□□ -0.95
PCNX1-207ENST00000554691 DAXXQ9UER7 740 aaPredicted RBP9.14□□□□□ -0.95
PCNX1-207ENST00000554691 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.13□□□□□ -0.95
PCNX1-207ENST00000554691 GLIPR1L2Q4G1C9 344 aa9.11□□□□□ -0.95
PCNX1-207ENST00000554691 UBTFP17480 764 aaKnown RBP9.09□□□□□ -0.95
PCNX1-207ENST00000554691 BCL11AQ9H165 835 aa9.08□□□□□ -0.96
PCNX1-207ENST00000554691 ANP32AP39687 249 aaKnown RBP8.99□□□□□ -0.97
PCNX1-207ENST00000554691 ANP32CO43423 234 aa8.95□□□□□ -0.98
PCNX1-207ENST00000554691 HNRNPUL2Q1KMD3 747 aaKnown RBP8.95□□□□□ -0.98
PCNX1-207ENST00000554691 BCANQ96GW7 911 aa8.93□□□□□ -0.98
PCNX1-207ENST00000554691 FKBP8Q14318 412 aa8.9□□□□□ -0.98
PCNX1-207ENST00000554691 ERICH6BQ5W0A0 696 aa8.88□□□□□ -0.99
PCNX1-207ENST00000554691 MYO15BQ96JP2 1530 aa8.87□□□□□ -0.99
PCNX1-207ENST00000554691 EIF5BO60841 1220 aaKnown RBP8.86□□□□□ -0.99
PCNX1-207ENST00000554691 MIER1Q8N108 512 aa8.85□□□□□ -0.99
PCNX1-207ENST00000554691 ZBTB47Q9UFB7 747 aaPredicted RBP8.83□□□□□ -1
PCNX1-207ENST00000554691 SUPT16HQ9Y5B9 1047 aaKnown RBP8.82□□□□□ -1
PCNX1-207ENST00000554691 ZCCHC6Q5VYS8 1495 aaKnown RBP8.76□□□□□ -1.01
PCNX1-207ENST00000554691 PPM1GO15355 546 aaPredicted RBP8.76□□□□□ -1.01
PCNX1-207ENST00000554691 PRKCSHP14314 528 aaPredicted RBP8.76□□□□□ -1.01
PCNX1-207ENST00000554691 CSRNP3Q8WYN3 585 aa8.75□□□□□ -1.01
PCNX1-207ENST00000554691 DDRGK1Q96HY6 314 aa8.73□□□□□ -1.01
PCNX1-207ENST00000554691 TSHZ2Q9NRE2 1034 aa8.73□□□□□ -1.01
PCNX1-207ENST00000554691 RANGAP1P46060 587 aaPredicted RBP8.72□□□□□ -1.01
PCNX1-207ENST00000554691 DEKP35659 375 aaKnown RBP8.72□□□□□ -1.01
PCNX1-207ENST00000554691 RBM19Q9Y4C8 960 aaKnown RBP8.71□□□□□ -1.02
PCNX1-207ENST00000554691 NOP58Q9Y2X3 529 aaKnown RBP8.71□□□□□ -1.02
PCNX1-207ENST00000554691 ABCC9O60706 1549 aa8.7□□□□□ -1.02
PCNX1-207ENST00000554691 NBR1Q14596 966 aa8.7□□□□□ -1.02
PCNX1-207ENST00000554691 ANP32BQ92688 251 aaKnown RBP8.69□□□□□ -1.02
PCNX1-207ENST00000554691 EEA1Q15075 1411 aa8.69□□□□□ -1.02
PCNX1-207ENST00000554691 ITGAEP38570 1179 aa8.69□□□□□ -1.02
PCNX1-207ENST00000554691 PPP4R2Q9NY27 417 aa8.68□□□□□ -1.02
PCNX1-207ENST00000554691 HNRNPUQ00839 825 aaKnown RBP eCLIP8.68□□□□□ -1.02
PCNX1-207ENST00000554691 CCDC136Q96JN2 1154 aa8.67□□□□□ -1.02
PCNX1-207ENST00000554691 ATP1B4Q9UN42 357 aaPredicted RBP8.66□□□□□ -1.02
PCNX1-207ENST00000554691 NEFMP07197 916 aa8.65□□□□□ -1.02
PCNX1-207ENST00000554691 FANCIQ9NVI1 1328 aa8.65□□□□□ -1.03
PCNX1-207ENST00000554691 CCER2I3L3R5 266 aa8.64□□□□□ -1.03
PCNX1-207ENST00000554691 DDX10Q13206 875 aaKnown RBP8.62□□□□□ -1.03
PCNX1-207ENST00000554691 USP35Q9P2H5 1018 aa8.62□□□□□ -1.03
PCNX1-207ENST00000554691 NCLP19338 710 aaKnown RBP8.62□□□□□ -1.03
PCNX1-207ENST00000554691 TNNT2P45379 298 aaPredicted RBP8.61□□□□□ -1.03
PCNX1-207ENST00000554691 NPM2Q86SE8 214 aaKnown RBP8.61□□□□□ -1.03
PCNX1-207ENST00000554691 TIMELESSQ9UNS1 1208 aa8.61□□□□□ -1.03
PCNX1-207ENST00000554691 UPF2Q9HAU5 1272 aaKnown RBP8.61□□□□□ -1.03
PCNX1-207ENST00000554691 TONSLQ96HA7 1378 aa8.6□□□□□ -1.03
PCNX1-207ENST00000554691 TRIM52Q96A61 297 aa8.58□□□□□ -1.04
PCNX1-207ENST00000554691 RSPH6AQ9H0K4 717 aa8.58□□□□□ -1.04
PCNX1-207ENST00000554691 TNIKQ9UKE5 1360 aa8.58□□□□□ -1.04
PCNX1-207ENST00000554691 FAM50AQ14320 339 aaKnown RBP8.57□□□□□ -1.04
PCNX1-207ENST00000554691 BECN1Q14457 450 aa8.56□□□□□ -1.04
PCNX1-207ENST00000554691 POLR3GLQ9BT43 218 aa8.56□□□□□ -1.04
PCNX1-207ENST00000554691 L1TD1Q5T7N2 865 aaKnown RBP8.56□□□□□ -1.04
PCNX1-207ENST00000554691 CEP162Q5TB80 1403 aa8.56□□□□□ -1.04
PCNX1-207ENST00000554691 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.55□□□□□ -1.04
PCNX1-207ENST00000554691 TRIM44Q96DX7 344 aaPredicted RBP8.54□□□□□ -1.04
PCNX1-207ENST00000554691 GOLGA3Q08378 1498 aa8.53□□□□□ -1.04
PCNX1-207ENST00000554691 PABPN1Q86U42 306 aaKnown RBP eCLIP8.52□□□□□ -1.05
PCNX1-207ENST00000554691 NAP1L5Q96NT1 182 aaPredicted RBP8.5□□□□□ -1.05
PCNX1-207ENST00000554691 IPO9Q96P70 1041 aaKnown RBP8.5□□□□□ -1.05
PCNX1-207ENST00000554691 MRS2Q9HD23 443 aa8.5□□□□□ -1.05
PCNX1-207ENST00000554691 CLIP1P30622 1438 aa8.5□□□□□ -1.05
PCNX1-207ENST00000554691 WRNQ14191 1432 aaPredicted RBP eCLIP8.49□□□□□ -1.05
PCNX1-207ENST00000554691 HSP90AA1P07900 732 aaKnown RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms