RNA–Protein interactions for RNA: ENST00000637741.1

ARID1B-229, Transcript of AT-rich interaction domain 1B, humanhuman

TSL 5

Gene ARID1B, Length 3,915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1B-229ENST00000637741 NISCHQ9Y2I1 1504 aa15.41■□□□□ 0.06
ARID1B-229ENST00000637741 DCAF8L2P0C7V8 631 aa14.56□□□□□ -0.08
ARID1B-229ENST00000637741 SHROOM4Q9ULL8 1493 aa13.83□□□□□ -0.19
ARID1B-229ENST00000637741 SUPT5HO00267 1087 aaKnown RBP13.81□□□□□ -0.2
ARID1B-229ENST00000637741 ABCC9O60706 1549 aa13.51□□□□□ -0.25
ARID1B-229ENST00000637741 EHMT2Q96KQ7 1210 aa13.46□□□□□ -0.26
ARID1B-229ENST00000637741 CCDC180Q9P1Z9 1646 aa13.41□□□□□ -0.26
ARID1B-229ENST00000637741 FAM9AQ8IZU1 332 aaPredicted RBP13.04□□□□□ -0.32
ARID1B-229ENST00000637741 TTBK1Q5TCY1 1321 aaPredicted RBP12.88□□□□□ -0.35
ARID1B-229ENST00000637741 PABPN1Q86U42 306 aaKnown RBP eCLIP12.85□□□□□ -0.35
ARID1B-229ENST00000637741 RB1CC1Q8TDY2 1594 aa12.83□□□□□ -0.36
ARID1B-229ENST00000637741 NACADO15069 1562 aa12.78□□□□□ -0.36
ARID1B-229ENST00000637741 RANGAP1P46060 587 aaPredicted RBP12.77□□□□□ -0.36
ARID1B-229ENST00000637741 ZCCHC6Q5VYS8 1495 aaKnown RBP12.77□□□□□ -0.37
ARID1B-229ENST00000637741 PCGF6Q9BYE7 350 aa12.64□□□□□ -0.39
ARID1B-229ENST00000637741 PPARGC1BQ86YN6 1023 aaKnown RBP12.61□□□□□ -0.39
ARID1B-229ENST00000637741 TRIM41Q8WV44 630 aa12.58□□□□□ -0.4
ARID1B-229ENST00000637741 DCAF1Q9Y4B6 1507 aa12.57□□□□□ -0.4
ARID1B-229ENST00000637741 SCRIBQ14160 1630 aa12.56□□□□□ -0.4
ARID1B-229ENST00000637741 MYO15BQ96JP2 1530 aa12.55□□□□□ -0.4
ARID1B-229ENST00000637741 LOC105371045A0A1W2PR82 267 aa12.52□□□□□ -0.41
ARID1B-229ENST00000637741 CHIC1Q5VXU3 224 aa12.38□□□□□ -0.43
ARID1B-229ENST00000637741 UBTFP17480 764 aaKnown RBP12.36□□□□□ -0.43
ARID1B-229ENST00000637741 ATP1B4Q9UN42 357 aaPredicted RBP12.36□□□□□ -0.43
ARID1B-229ENST00000637741 APLP2Q06481 763 aa12.32□□□□□ -0.44
ARID1B-229ENST00000637741 DNAJC5BQ9UF47 199 aa12.21□□□□□ -0.45
ARID1B-229ENST00000637741 BICRAQ9NZM4 1560 aa12.18□□□□□ -0.46
ARID1B-229ENST00000637741 UNC13AQ9UPW8 1703 aa12.14□□□□□ -0.47
ARID1B-229ENST00000637741 CCER1Q8TC90 406 aaPredicted RBP12.12□□□□□ -0.47
ARID1B-229ENST00000637741 ITGAEP38570 1179 aa12.09□□□□□ -0.47
ARID1B-229ENST00000637741 CECR2Q9BXF3 1484 aa12.07□□□□□ -0.48
ARID1B-229ENST00000637741 EIF4G1Q04637 1599 aaKnown RBP12.03□□□□□ -0.48
ARID1B-229ENST00000637741 TRIM26Q12899 539 aaPredicted RBP12.01□□□□□ -0.49
ARID1B-229ENST00000637741 HRCP23327 699 aa12□□□□□ -0.49
ARID1B-229ENST00000637741 HNRNPUL2Q1KMD3 747 aaKnown RBP11.99□□□□□ -0.49
ARID1B-229ENST00000637741 BAZ1AQ9NRL2 1556 aaPredicted RBP11.98□□□□□ -0.49
ARID1B-229ENST00000637741 CC2D2AQ9P2K1 1620 aa11.97□□□□□ -0.49
ARID1B-229ENST00000637741 BAZ1BQ9UIG0 1483 aaKnown RBP11.93□□□□□ -0.5
ARID1B-229ENST00000637741 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.92□□□□□ -0.5
ARID1B-229ENST00000637741 ZEB1P37275 1124 aaPredicted RBP11.91□□□□□ -0.5
ARID1B-229ENST00000637741 MROH2BQ7Z745 1585 aa11.89□□□□□ -0.51
ARID1B-229ENST00000637741 SMARCA2P51531 1590 aa11.89□□□□□ -0.51
ARID1B-229ENST00000637741 ATAD2BQ9ULI0 1458 aa11.89□□□□□ -0.51
ARID1B-229ENST00000637741 YTHDC1Q96MU7 727 aaKnown RBP11.89□□□□□ -0.51
ARID1B-229ENST00000637741 RSF1Q96T23 1441 aaPredicted RBP11.88□□□□□ -0.51
ARID1B-229ENST00000637741 SMARCA4P51532 1647 aa11.86□□□□□ -0.51
ARID1B-229ENST00000637741 NCAPD3P42695 1498 aa11.83□□□□□ -0.52
ARID1B-229ENST00000637741 CNGB1Q14028 1251 aaPredicted RBP11.82□□□□□ -0.52
ARID1B-229ENST00000637741 ARID3CA6NKF2 412 aa11.81□□□□□ -0.52
ARID1B-229ENST00000637741 P3H3Q8IVL6 736 aa11.8□□□□□ -0.52
ARID1B-229ENST00000637741 ERCC6Q03468 1493 aa11.78□□□□□ -0.52
ARID1B-229ENST00000637741 FBLN2P98095 1184 aa11.75□□□□□ -0.53
ARID1B-229ENST00000637741 PELP1Q8IZL8 1130 aaKnown RBP11.74□□□□□ -0.53
ARID1B-229ENST00000637741 WIZO95785 1651 aa11.73□□□□□ -0.53
ARID1B-229ENST00000637741 POLR3GLQ9BT43 218 aa11.67□□□□□ -0.54
ARID1B-229ENST00000637741 MYT1LQ9UL68 1186 aa11.67□□□□□ -0.54
ARID1B-229ENST00000637741 HMGXB3Q12766 1538 aa11.67□□□□□ -0.54
ARID1B-229ENST00000637741 CADPSQ9ULU8 1353 aa11.66□□□□□ -0.54
ARID1B-229ENST00000637741 FAM50AQ14320 339 aaKnown RBP11.66□□□□□ -0.54
ARID1B-229ENST00000637741 PDS5BQ9NTI5 1447 aa11.66□□□□□ -0.54
ARID1B-229ENST00000637741 CSRNP3Q8WYN3 585 aa11.64□□□□□ -0.55
ARID1B-229ENST00000637741 TOP2AP11388 1531 aaKnown RBP11.61□□□□□ -0.55
ARID1B-229ENST00000637741 CENPBP07199 599 aaPredicted RBP11.61□□□□□ -0.55
ARID1B-229ENST00000637741 NESP48681 1621 aa11.59□□□□□ -0.55
ARID1B-229ENST00000637741 CCDC88BA6NC98 1476 aa11.59□□□□□ -0.55
ARID1B-229ENST00000637741 NEUROD1Q13562 356 aa11.58□□□□□ -0.56
ARID1B-229ENST00000637741 PEG3Q9GZU2 1588 aa11.57□□□□□ -0.56
ARID1B-229ENST00000637741 MYT1Q01538 1121 aa11.5□□□□□ -0.57
ARID1B-229ENST00000637741 FANCD2Q9BXW9 1451 aa11.49□□□□□ -0.57
ARID1B-229ENST00000637741 CEP164Q9UPV0 1460 aa11.49□□□□□ -0.57
ARID1B-229ENST00000637741 TRIM52Q96A61 297 aa11.48□□□□□ -0.57
ARID1B-229ENST00000637741 LAMC3Q9Y6N6 1575 aa11.46□□□□□ -0.58
ARID1B-229ENST00000637741 DIEXFQ68CQ4 756 aaKnown RBP11.45□□□□□ -0.58
ARID1B-229ENST00000637741 CFTRP13569 1480 aa11.45□□□□□ -0.58
ARID1B-229ENST00000637741 ZNF326Q5BKZ1 582 aaKnown RBP11.44□□□□□ -0.58
ARID1B-229ENST00000637741 ZNF777Q9ULD5 760 aaPredicted RBP11.41□□□□□ -0.58
ARID1B-229ENST00000637741 MRC2Q9UBG0 1479 aa11.38□□□□□ -0.59
ARID1B-229ENST00000637741 CHIC2Q9UKJ5 165 aa11.35□□□□□ -0.59
ARID1B-229ENST00000637741 WRNQ14191 1432 aaPredicted RBP eCLIP11.34□□□□□ -0.59
ARID1B-229ENST00000637741 CHMP7Q8WUX9 453 aaPredicted RBP11.34□□□□□ -0.59
ARID1B-229ENST00000637741 ABCC8Q09428 1581 aa11.33□□□□□ -0.6
ARID1B-229ENST00000637741 SOGA1O94964 1423 aa11.32□□□□□ -0.6
ARID1B-229ENST00000637741 HIRIP3Q9BW71 556 aaPredicted RBP11.32□□□□□ -0.6
ARID1B-229ENST00000637741 SLC4A1APQ9BWU0 796 aaKnown RBP11.31□□□□□ -0.6
ARID1B-229ENST00000637741 TDRD9Q8NDG6 1382 aaKnown RBP11.3□□□□□ -0.6
ARID1B-229ENST00000637741 SENP3Q9H4L4 574 aaPredicted RBP11.29□□□□□ -0.6
ARID1B-229ENST00000637741 CUX2O14529 1486 aa11.28□□□□□ -0.6
ARID1B-229ENST00000637741 ZNF316A6NFI3 1004 aaPredicted RBP11.26□□□□□ -0.61
ARID1B-229ENST00000637741 PLPPR3Q6T4P5 718 aa11.24□□□□□ -0.61
ARID1B-229ENST00000637741 OSCARQ8IYS5 282 aa11.24□□□□□ -0.61
ARID1B-229ENST00000637741 TOPBP1Q92547 1522 aa11.24□□□□□ -0.61
ARID1B-229ENST00000637741 BCANQ96GW7 911 aa11.24□□□□□ -0.61
ARID1B-229ENST00000637741 KIF21AQ7Z4S6 1674 aa11.23□□□□□ -0.61
ARID1B-229ENST00000637741 URB2Q14146 1524 aaKnown RBP11.22□□□□□ -0.61
ARID1B-229ENST00000637741 NEFLP07196 543 aa11.22□□□□□ -0.61
ARID1B-229ENST00000637741 RAD54L2Q9Y4B4 1467 aa11.21□□□□□ -0.62
ARID1B-229ENST00000637741 FGD5Q6ZNL6 1462 aa11.2□□□□□ -0.62
ARID1B-229ENST00000637741 CEP162Q5TB80 1403 aa11.2□□□□□ -0.62
ARID1B-229ENST00000637741 IFT140Q96RY7 1462 aa11.2□□□□□ -0.62
ARID1B-229ENST00000637741 GTF3C3Q9Y5Q9 886 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms