RNA–Protein interactions for RNA: ENST00000637568.1

ARID1B-227, Transcript of AT-rich interaction domain 1B, humanhuman

TSL 5

Gene ARID1B, Length 4,610 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1B-227ENST00000637568 DCAF8L2P0C7V8 631 aa21.03■□□□□ 0.96
ARID1B-227ENST00000637568 SUPT5HO00267 1087 aaKnown RBP20.74■□□□□ 0.91
ARID1B-227ENST00000637568 NISCHQ9Y2I1 1504 aa20.46■□□□□ 0.87
ARID1B-227ENST00000637568 PELP1Q8IZL8 1130 aaKnown RBP20.42■□□□□ 0.86
ARID1B-227ENST00000637568 SHROOM4Q9ULL8 1493 aa20.14■□□□□ 0.81
ARID1B-227ENST00000637568 PCGF6Q9BYE7 350 aa20.07■□□□□ 0.8
ARID1B-227ENST00000637568 MYT1Q01538 1121 aa19.98■□□□□ 0.79
ARID1B-227ENST00000637568 CENPBP07199 599 aaPredicted RBP19.89■□□□□ 0.78
ARID1B-227ENST00000637568 ZEB1P37275 1124 aaPredicted RBP19.86■□□□□ 0.77
ARID1B-227ENST00000637568 EHMT2Q96KQ7 1210 aa19.84■□□□□ 0.77
ARID1B-227ENST00000637568 APLP2Q06481 763 aa19.6■□□□□ 0.73
ARID1B-227ENST00000637568 FAM9AQ8IZU1 332 aaPredicted RBP19.5■□□□□ 0.71
ARID1B-227ENST00000637568 ERICH6Q7L0X2 663 aa19.49■□□□□ 0.71
ARID1B-227ENST00000637568 CCER1Q8TC90 406 aaPredicted RBP19.47■□□□□ 0.71
ARID1B-227ENST00000637568 HRCP23327 699 aa19.47■□□□□ 0.71
ARID1B-227ENST00000637568 TTBK1Q5TCY1 1321 aaPredicted RBP19.31■□□□□ 0.68
ARID1B-227ENST00000637568 TRIM41Q8WV44 630 aa19.21■□□□□ 0.67
ARID1B-227ENST00000637568 TRIM26Q12899 539 aaPredicted RBP19.21■□□□□ 0.67
ARID1B-227ENST00000637568 YTHDC1Q96MU7 727 aaKnown RBP19.18■□□□□ 0.66
ARID1B-227ENST00000637568 NEFLP07196 543 aa19.17■□□□□ 0.66
ARID1B-227ENST00000637568 PPARGC1BQ86YN6 1023 aaKnown RBP18.91■□□□□ 0.62
ARID1B-227ENST00000637568 UBTFP17480 764 aaKnown RBP18.86■□□□□ 0.61
ARID1B-227ENST00000637568 RANGAP1P46060 587 aaPredicted RBP18.8■□□□□ 0.6
ARID1B-227ENST00000637568 CHIC1Q5VXU3 224 aa18.8■□□□□ 0.6
ARID1B-227ENST00000637568 LOC105371045A0A1W2PR82 267 aa18.72■□□□□ 0.59
ARID1B-227ENST00000637568 DIEXFQ68CQ4 756 aaKnown RBP18.66■□□□□ 0.58
ARID1B-227ENST00000637568 ATP1B4Q9UN42 357 aaPredicted RBP18.56■□□□□ 0.56
ARID1B-227ENST00000637568 GTF3C3Q9Y5Q9 886 aa18.54■□□□□ 0.56
ARID1B-227ENST00000637568 DAXXQ9UER7 740 aaPredicted RBP18.48■□□□□ 0.55
ARID1B-227ENST00000637568 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.48■□□□□ 0.55
ARID1B-227ENST00000637568 HNRNPUL2Q1KMD3 747 aaKnown RBP18.42■□□□□ 0.54
ARID1B-227ENST00000637568 RTL5Q5HYW3 569 aaPredicted RBP18.39■□□□□ 0.53
ARID1B-227ENST00000637568 ACIN1Q9UKV3 1341 aaKnown RBP18.36■□□□□ 0.53
ARID1B-227ENST00000637568 ITGAEP38570 1179 aa18.28■□□□□ 0.52
ARID1B-227ENST00000637568 ZNF316A6NFI3 1004 aaPredicted RBP18.16■□□□□ 0.5
ARID1B-227ENST00000637568 BCANQ96GW7 911 aa18.13■□□□□ 0.49
ARID1B-227ENST00000637568 POLR3GLQ9BT43 218 aa18.11■□□□□ 0.49
ARID1B-227ENST00000637568 CDK11AQ9UQ88 783 aaPredicted RBP18.09■□□□□ 0.49
ARID1B-227ENST00000637568 CLSPNQ9HAW4 1339 aa18.03■□□□□ 0.48
ARID1B-227ENST00000637568 CNGB1Q14028 1251 aaPredicted RBP17.98■□□□□ 0.47
ARID1B-227ENST00000637568 ANP32CO43423 234 aa17.96■□□□□ 0.47
ARID1B-227ENST00000637568 SCAF1Q9H7N4 1312 aaKnown RBP17.92■□□□□ 0.46
ARID1B-227ENST00000637568 NEUROD1Q13562 356 aa17.89■□□□□ 0.46
ARID1B-227ENST00000637568 DCAF1Q9Y4B6 1507 aa17.84■□□□□ 0.45
ARID1B-227ENST00000637568 MYT1LQ9UL68 1186 aa17.81■□□□□ 0.44
ARID1B-227ENST00000637568 ANP32AP39687 249 aaKnown RBP17.79■□□□□ 0.44
ARID1B-227ENST00000637568 FAM50AQ14320 339 aaKnown RBP17.78■□□□□ 0.44
ARID1B-227ENST00000637568 FKBP8Q14318 412 aa17.73■□□□□ 0.43
ARID1B-227ENST00000637568 EIF5BO60841 1220 aaKnown RBP17.65■□□□□ 0.42
ARID1B-227ENST00000637568 TRIM52Q96A61 297 aa17.64■□□□□ 0.41
ARID1B-227ENST00000637568 CSRNP3Q8WYN3 585 aa17.54■□□□□ 0.4
ARID1B-227ENST00000637568 NPM2Q86SE8 214 aaKnown RBP17.52■□□□□ 0.4
ARID1B-227ENST00000637568 GLIPR1L2Q4G1C9 344 aa17.52■□□□□ 0.39
ARID1B-227ENST00000637568 MIER1Q8N108 512 aa17.5■□□□□ 0.39
ARID1B-227ENST00000637568 SLC4A1APQ9BWU0 796 aaKnown RBP17.5■□□□□ 0.39
ARID1B-227ENST00000637568 HNRNPUQ00839 825 aaKnown RBP eCLIP17.49■□□□□ 0.39
ARID1B-227ENST00000637568 ANP32EQ9BTT0 268 aa17.49■□□□□ 0.39
ARID1B-227ENST00000637568 ZNF326Q5BKZ1 582 aaKnown RBP17.45■□□□□ 0.38
ARID1B-227ENST00000637568 DDX10Q13206 875 aaKnown RBP17.45■□□□□ 0.38
ARID1B-227ENST00000637568 ZBTB47Q9UFB7 747 aaPredicted RBP17.44■□□□□ 0.38
ARID1B-227ENST00000637568 NBR1Q14596 966 aa17.42■□□□□ 0.38
ARID1B-227ENST00000637568 CANXP27824 592 aaKnown RBP17.38■□□□□ 0.37
ARID1B-227ENST00000637568 CCDC136Q96JN2 1154 aa17.36■□□□□ 0.37
ARID1B-227ENST00000637568 ANP32BQ92688 251 aaKnown RBP17.34■□□□□ 0.37
ARID1B-227ENST00000637568 TONSLQ96HA7 1378 aa17.33■□□□□ 0.37
ARID1B-227ENST00000637568 FAM9BQ8IZU0 186 aa17.3■□□□□ 0.36
ARID1B-227ENST00000637568 UPF2Q9HAU5 1272 aaKnown RBP17.27■□□□□ 0.35
ARID1B-227ENST00000637568 MYO15BQ96JP2 1530 aa17.22■□□□□ 0.35
ARID1B-227ENST00000637568 CCDC180Q9P1Z9 1646 aa17.19■□□□□ 0.34
ARID1B-227ENST00000637568 HSP90AA1P07900 732 aaKnown RBP17.18■□□□□ 0.34
ARID1B-227ENST00000637568 IRX6P78412 446 aaPredicted RBP17.17■□□□□ 0.34
ARID1B-227ENST00000637568 MRS2Q9HD23 443 aa17.17■□□□□ 0.34
ARID1B-227ENST00000637568 BCL11AQ9H165 835 aa17.16■□□□□ 0.34
ARID1B-227ENST00000637568 TMC1Q8TDI8 760 aa17.15■□□□□ 0.34
ARID1B-227ENST00000637568 SUPT16HQ9Y5B9 1047 aaKnown RBP17.13■□□□□ 0.33
ARID1B-227ENST00000637568 P3H3Q8IVL6 736 aa17.12■□□□□ 0.33
ARID1B-227ENST00000637568 NEFMP07197 916 aa17.12■□□□□ 0.33
ARID1B-227ENST00000637568 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.1■□□□□ 0.33
ARID1B-227ENST00000637568 DDRGK1Q96HY6 314 aa17.08■□□□□ 0.32
ARID1B-227ENST00000637568 SALL2Q9Y467 1007 aaPredicted RBP17.07■□□□□ 0.32
ARID1B-227ENST00000637568 PPM1GO15355 546 aaPredicted RBP17.04■□□□□ 0.32
ARID1B-227ENST00000637568 ARXQ96QS3 562 aa17.03■□□□□ 0.32
ARID1B-227ENST00000637568 PABPN1Q86U42 306 aaKnown RBP eCLIP17.03■□□□□ 0.32
ARID1B-227ENST00000637568 ERICH6BQ5W0A0 696 aa17.02■□□□□ 0.32
ARID1B-227ENST00000637568 ZCCHC6Q5VYS8 1495 aaKnown RBP17.01■□□□□ 0.31
ARID1B-227ENST00000637568 HIRIP3Q9BW71 556 aaPredicted RBP17.01■□□□□ 0.31
ARID1B-227ENST00000637568 EIF4G2P78344 907 aaKnown RBP eCLIP16.98■□□□□ 0.31
ARID1B-227ENST00000637568 PPP4R2Q9NY27 417 aa16.98■□□□□ 0.31
ARID1B-227ENST00000637568 NOP58Q9Y2X3 529 aaKnown RBP16.97■□□□□ 0.31
ARID1B-227ENST00000637568 BECN1Q14457 450 aa16.96■□□□□ 0.31
ARID1B-227ENST00000637568 CLIP1P30622 1438 aa16.95■□□□□ 0.3
ARID1B-227ENST00000637568 TRIM44Q96DX7 344 aaPredicted RBP16.95■□□□□ 0.3
ARID1B-227ENST00000637568 ABCC9O60706 1549 aa16.93■□□□□ 0.3
ARID1B-227ENST00000637568 RBM19Q9Y4C8 960 aaKnown RBP16.93■□□□□ 0.3
ARID1B-227ENST00000637568 CEP162Q5TB80 1403 aa16.91■□□□□ 0.3
ARID1B-227ENST00000637568 ZNF777Q9ULD5 760 aaPredicted RBP16.9■□□□□ 0.3
ARID1B-227ENST00000637568 WDR43Q15061 677 aaKnown RBP eCLIP16.9■□□□□ 0.3
ARID1B-227ENST00000637568 DEKP35659 375 aaKnown RBP16.9■□□□□ 0.3
ARID1B-227ENST00000637568 RTN4Q9NQC3 1192 aaKnown RBP16.9■□□□□ 0.3
ARID1B-227ENST00000637568 ARID3CA6NKF2 412 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms