Protein–RNA interactions for Protein: O95164

UBL3, Ubiquitin-like protein 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3O95164 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC21.6■■□□□ 1.05
UBL3O95164 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
UBL3O95164 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
UBL3O95164 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.6■■□□□ 1.05
UBL3O95164 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.59■■□□□ 1.05
UBL3O95164 AC092803.2-201ENST00000564287 1899 ntBASIC21.59■■□□□ 1.05
UBL3O95164 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
UBL3O95164 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
UBL3O95164 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
UBL3O95164 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.58■■□□□ 1.05
UBL3O95164 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
UBL3O95164 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
UBL3O95164 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
UBL3O95164 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
UBL3O95164 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
UBL3O95164 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
UBL3O95164 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
UBL3O95164 ABHD17AP3-201ENST00000503096 1137 ntBASIC21.57■■□□□ 1.04
UBL3O95164 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
UBL3O95164 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.57■■□□□ 1.04
UBL3O95164 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
UBL3O95164 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC21.56■■□□□ 1.04
UBL3O95164 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
UBL3O95164 GPX1-201ENST00000419349 1106 ntBASIC21.56■■□□□ 1.04
UBL3O95164 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.56■■□□□ 1.04
UBL3O95164 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.55■■□□□ 1.04
UBL3O95164 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC21.55■■□□□ 1.04
UBL3O95164 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
UBL3O95164 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.55■■□□□ 1.04
UBL3O95164 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
UBL3O95164 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
UBL3O95164 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
UBL3O95164 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
UBL3O95164 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC21.54■■□□□ 1.04
UBL3O95164 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
UBL3O95164 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
UBL3O95164 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.53■■□□□ 1.04
UBL3O95164 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.53■■□□□ 1.04
UBL3O95164 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
UBL3O95164 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.53■■□□□ 1.04
UBL3O95164 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
UBL3O95164 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
UBL3O95164 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
UBL3O95164 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
UBL3O95164 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
UBL3O95164 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
UBL3O95164 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
UBL3O95164 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
UBL3O95164 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
UBL3O95164 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
UBL3O95164 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
UBL3O95164 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
UBL3O95164 AC092296.2-201ENST00000589470 999 ntBASIC21.51■■□□□ 1.03
UBL3O95164 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.51■■□□□ 1.03
UBL3O95164 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
UBL3O95164 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
UBL3O95164 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
UBL3O95164 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.5■■□□□ 1.03
UBL3O95164 AC142472.1-201ENST00000612013 1741 ntBASIC21.5■■□□□ 1.03
UBL3O95164 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
UBL3O95164 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC21.5■■□□□ 1.03
UBL3O95164 AL157400.5-201ENST00000507624 621 ntBASIC21.5■■□□□ 1.03
UBL3O95164 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
UBL3O95164 AP004609.3-201ENST00000610705 1884 ntBASIC21.49■■□□□ 1.03
UBL3O95164 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
UBL3O95164 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
UBL3O95164 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
UBL3O95164 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
UBL3O95164 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
UBL3O95164 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
UBL3O95164 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.49■■□□□ 1.03
UBL3O95164 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
UBL3O95164 ECEL1P2-201ENST00000461596 1295 ntBASIC21.48■■□□□ 1.03
UBL3O95164 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.48■■□□□ 1.03
UBL3O95164 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.48■■□□□ 1.03
UBL3O95164 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
UBL3O95164 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
UBL3O95164 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
UBL3O95164 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
UBL3O95164 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
UBL3O95164 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
UBL3O95164 AL359504.2-201ENST00000605506 1601 ntBASIC21.47■■□□□ 1.03
UBL3O95164 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.46■■□□□ 1.03
UBL3O95164 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
UBL3O95164 HSD17B1P1-201ENST00000590052 955 ntBASIC21.46■■□□□ 1.03
UBL3O95164 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.46■■□□□ 1.03
UBL3O95164 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
UBL3O95164 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.46■■□□□ 1.03
UBL3O95164 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.45■■□□□ 1.02
UBL3O95164 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
UBL3O95164 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.45■■□□□ 1.02
UBL3O95164 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.45■■□□□ 1.02
UBL3O95164 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
UBL3O95164 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.44■■□□□ 1.02
UBL3O95164 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
UBL3O95164 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
UBL3O95164 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
UBL3O95164 RNF126P1-201ENST00000567452 1320 ntBASIC21.44■■□□□ 1.02
UBL3O95164 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.43■■□□□ 1.02
UBL3O95164 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms