Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 DUX4L18-201ENST00000553347 1267 ntBASIC25.6■■□□□ 1.69
BEST1O76090 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC25.6■■□□□ 1.69
BEST1O76090 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
BEST1O76090 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
BEST1O76090 TSPY13P-201ENST00000338964 914 ntBASIC25.59■■□□□ 1.69
BEST1O76090 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
BEST1O76090 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
BEST1O76090 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
BEST1O76090 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
BEST1O76090 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
BEST1O76090 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
BEST1O76090 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
BEST1O76090 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC25.58■■□□□ 1.69
BEST1O76090 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
BEST1O76090 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
BEST1O76090 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
BEST1O76090 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC25.58■■□□□ 1.68
BEST1O76090 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.68
BEST1O76090 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC25.58■■□□□ 1.68
BEST1O76090 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
BEST1O76090 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
BEST1O76090 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
BEST1O76090 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
BEST1O76090 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC25.57■■□□□ 1.68
BEST1O76090 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
BEST1O76090 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC25.57■■□□□ 1.68
BEST1O76090 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC25.57■■□□□ 1.68
BEST1O76090 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
BEST1O76090 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
BEST1O76090 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
BEST1O76090 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC25.56■■□□□ 1.68
BEST1O76090 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC25.56■■□□□ 1.68
BEST1O76090 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
BEST1O76090 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
BEST1O76090 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
BEST1O76090 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
BEST1O76090 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC25.55■■□□□ 1.68
BEST1O76090 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC25.55■■□□□ 1.68
BEST1O76090 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
BEST1O76090 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC25.55■■□□□ 1.68
BEST1O76090 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
BEST1O76090 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
BEST1O76090 GUK1-208ENST00000366728 842 ntTSL 2 BASIC25.54■■□□□ 1.68
BEST1O76090 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC25.54■■□□□ 1.68
BEST1O76090 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
BEST1O76090 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
BEST1O76090 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
BEST1O76090 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
BEST1O76090 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
BEST1O76090 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC25.53■■□□□ 1.68
BEST1O76090 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
BEST1O76090 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
BEST1O76090 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
BEST1O76090 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
BEST1O76090 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
BEST1O76090 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
BEST1O76090 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
BEST1O76090 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
BEST1O76090 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC25.52■■□□□ 1.68
BEST1O76090 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC25.51■■□□□ 1.67
BEST1O76090 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
BEST1O76090 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
BEST1O76090 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC25.51■■□□□ 1.67
BEST1O76090 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC25.51■■□□□ 1.67
BEST1O76090 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC25.51■■□□□ 1.67
BEST1O76090 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC25.51■■□□□ 1.67
BEST1O76090 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC25.51■■□□□ 1.67
BEST1O76090 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
BEST1O76090 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
BEST1O76090 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC25.5■■□□□ 1.67
BEST1O76090 MIR6765-201ENST00000614092 87 ntBASIC25.5■■□□□ 1.67
BEST1O76090 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC25.49■■□□□ 1.67
BEST1O76090 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
BEST1O76090 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC25.49■■□□□ 1.67
BEST1O76090 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
BEST1O76090 AC018755.3-202ENST00000596210 929 ntBASIC25.49■■□□□ 1.67
BEST1O76090 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC25.49■■□□□ 1.67
BEST1O76090 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC25.48■■□□□ 1.67
BEST1O76090 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
BEST1O76090 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC25.48■■□□□ 1.67
BEST1O76090 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
BEST1O76090 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
BEST1O76090 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
BEST1O76090 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC25.47■■□□□ 1.67
BEST1O76090 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
BEST1O76090 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC25.47■■□□□ 1.67
BEST1O76090 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
BEST1O76090 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
BEST1O76090 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
BEST1O76090 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
BEST1O76090 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
BEST1O76090 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC25.46■■□□□ 1.67
BEST1O76090 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
BEST1O76090 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
BEST1O76090 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC25.45■■□□□ 1.67
BEST1O76090 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC25.45■■□□□ 1.66
BEST1O76090 ERN1-208ENST00000606895 2068 ntBASIC25.45■■□□□ 1.66
BEST1O76090 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
BEST1O76090 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC25.45■■□□□ 1.66
BEST1O76090 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC25.45■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms