Protein–RNA interactions for Protein: O75387

SLC43A1, Large neutral amino acids transporter small subunit 3, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC43A1O75387 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SLC43A1O75387 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SLC43A1O75387 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
SLC43A1O75387 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SLC43A1O75387 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SLC43A1O75387 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.8■■□□□ 1.08
SLC43A1O75387 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SLC43A1O75387 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC43A1O75387 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
SLC43A1O75387 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC43A1O75387 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SLC43A1O75387 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC43A1O75387 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SLC43A1O75387 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.78■■□□□ 1.08
SLC43A1O75387 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
SLC43A1O75387 GPX1-201ENST00000419349 1106 ntBASIC21.78■■□□□ 1.08
SLC43A1O75387 ABHD17AP3-201ENST00000503096 1137 ntBASIC21.78■■□□□ 1.08
SLC43A1O75387 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC21.78■■□□□ 1.08
SLC43A1O75387 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.78■■□□□ 1.08
SLC43A1O75387 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SLC43A1O75387 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC43A1O75387 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.78■■□□□ 1.08
SLC43A1O75387 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC43A1O75387 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SLC43A1O75387 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
SLC43A1O75387 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SLC43A1O75387 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC43A1O75387 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLC43A1O75387 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLC43A1O75387 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLC43A1O75387 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SLC43A1O75387 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC21.77■■□□□ 1.08
SLC43A1O75387 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLC43A1O75387 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLC43A1O75387 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SLC43A1O75387 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SLC43A1O75387 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC21.76■■□□□ 1.07
SLC43A1O75387 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SLC43A1O75387 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.76■■□□□ 1.07
SLC43A1O75387 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.76■■□□□ 1.07
SLC43A1O75387 AL359504.2-201ENST00000605506 1601 ntBASIC21.76■■□□□ 1.07
SLC43A1O75387 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SLC43A1O75387 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC43A1O75387 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC43A1O75387 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SLC43A1O75387 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SLC43A1O75387 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC43A1O75387 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SLC43A1O75387 AL157400.5-201ENST00000507624 621 ntBASIC21.75■■□□□ 1.07
SLC43A1O75387 AC092296.2-201ENST00000589470 999 ntBASIC21.75■■□□□ 1.07
SLC43A1O75387 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.75■■□□□ 1.07
SLC43A1O75387 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC43A1O75387 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC43A1O75387 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SLC43A1O75387 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SLC43A1O75387 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC43A1O75387 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC43A1O75387 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SLC43A1O75387 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.73■■□□□ 1.07
SLC43A1O75387 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.73■■□□□ 1.07
SLC43A1O75387 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SLC43A1O75387 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SLC43A1O75387 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SLC43A1O75387 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SLC43A1O75387 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SLC43A1O75387 ECEL1P2-201ENST00000461596 1295 ntBASIC21.72■■□□□ 1.07
SLC43A1O75387 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
SLC43A1O75387 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SLC43A1O75387 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
SLC43A1O75387 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
SLC43A1O75387 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.71■■□□□ 1.07
SLC43A1O75387 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SLC43A1O75387 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC21.71■■□□□ 1.07
SLC43A1O75387 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.71■■□□□ 1.07
SLC43A1O75387 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SLC43A1O75387 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
SLC43A1O75387 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SLC43A1O75387 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
SLC43A1O75387 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
SLC43A1O75387 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC21.7■■□□□ 1.06
SLC43A1O75387 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.7■■□□□ 1.06
SLC43A1O75387 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.7■■□□□ 1.06
SLC43A1O75387 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.7■■□□□ 1.06
SLC43A1O75387 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SLC43A1O75387 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SLC43A1O75387 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SLC43A1O75387 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SLC43A1O75387 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.69■■□□□ 1.06
SLC43A1O75387 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.69■■□□□ 1.06
SLC43A1O75387 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.69■■□□□ 1.06
SLC43A1O75387 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.69■■□□□ 1.06
SLC43A1O75387 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.69■■□□□ 1.06
SLC43A1O75387 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SLC43A1O75387 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SLC43A1O75387 SMPD5-203ENST00000639008 1464 ntBASIC21.68■■□□□ 1.06
SLC43A1O75387 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.68■■□□□ 1.06
SLC43A1O75387 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
SLC43A1O75387 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SLC43A1O75387 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.68■■□□□ 1.06
SLC43A1O75387 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms