Protein–RNA interactions for Protein: O43676

NDUFB3, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB3O43676 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NDUFB3O43676 NTF6A-201ENST00000591175 560 ntBASIC20.16■□□□□ 0.82
NDUFB3O43676 RAP2CP1-202ENST00000605179 643 ntBASIC20.16■□□□□ 0.82
NDUFB3O43676 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NDUFB3O43676 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NDUFB3O43676 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
NDUFB3O43676 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
NDUFB3O43676 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NDUFB3O43676 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NDUFB3O43676 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.15■□□□□ 0.82
NDUFB3O43676 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NDUFB3O43676 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NDUFB3O43676 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NDUFB3O43676 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
NDUFB3O43676 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.15■□□□□ 0.82
NDUFB3O43676 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NDUFB3O43676 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
NDUFB3O43676 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.14■□□□□ 0.81
NDUFB3O43676 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC20.14■□□□□ 0.81
NDUFB3O43676 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NDUFB3O43676 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.14■□□□□ 0.81
NDUFB3O43676 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NDUFB3O43676 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NDUFB3O43676 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.81
NDUFB3O43676 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
NDUFB3O43676 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NDUFB3O43676 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NDUFB3O43676 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NDUFB3O43676 AL592293.1-201ENST00000502889 1188 ntBASIC20.13■□□□□ 0.81
NDUFB3O43676 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
NDUFB3O43676 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
NDUFB3O43676 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.13■□□□□ 0.81
NDUFB3O43676 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.13■□□□□ 0.81
NDUFB3O43676 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NDUFB3O43676 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NDUFB3O43676 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
NDUFB3O43676 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NDUFB3O43676 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.12■□□□□ 0.81
NDUFB3O43676 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
NDUFB3O43676 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
NDUFB3O43676 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.12■□□□□ 0.81
NDUFB3O43676 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.12■□□□□ 0.81
NDUFB3O43676 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
NDUFB3O43676 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NDUFB3O43676 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
NDUFB3O43676 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NDUFB3O43676 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NDUFB3O43676 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NDUFB3O43676 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
NDUFB3O43676 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.11■□□□□ 0.81
NDUFB3O43676 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NDUFB3O43676 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.1■□□□□ 0.81
NDUFB3O43676 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NDUFB3O43676 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
NDUFB3O43676 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NDUFB3O43676 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NDUFB3O43676 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
NDUFB3O43676 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NDUFB3O43676 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NDUFB3O43676 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NDUFB3O43676 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
NDUFB3O43676 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.08■□□□□ 0.81
NDUFB3O43676 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.08■□□□□ 0.81
NDUFB3O43676 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NDUFB3O43676 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NDUFB3O43676 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NDUFB3O43676 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NDUFB3O43676 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NDUFB3O43676 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
NDUFB3O43676 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.07■□□□□ 0.8
NDUFB3O43676 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NDUFB3O43676 KRT18P60-201ENST00000312876 1297 ntBASIC20.07■□□□□ 0.8
NDUFB3O43676 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NDUFB3O43676 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NDUFB3O43676 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NDUFB3O43676 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.06■□□□□ 0.8
NDUFB3O43676 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NDUFB3O43676 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
NDUFB3O43676 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.06■□□□□ 0.8
NDUFB3O43676 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NDUFB3O43676 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.06■□□□□ 0.8
NDUFB3O43676 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NDUFB3O43676 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NDUFB3O43676 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.06■□□□□ 0.8
NDUFB3O43676 AC092803.2-201ENST00000564287 1899 ntBASIC20.05■□□□□ 0.8
NDUFB3O43676 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
NDUFB3O43676 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NDUFB3O43676 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NDUFB3O43676 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.05■□□□□ 0.8
NDUFB3O43676 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NDUFB3O43676 AC018755.3-202ENST00000596210 929 ntBASIC20.05■□□□□ 0.8
NDUFB3O43676 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
NDUFB3O43676 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.05■□□□□ 0.8
NDUFB3O43676 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NDUFB3O43676 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NDUFB3O43676 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
NDUFB3O43676 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NDUFB3O43676 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
NDUFB3O43676 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NDUFB3O43676 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms