Protein–RNA interactions for Protein: A0A0A6YYK7

TRAV19, T-cell receptor alpha variable 19 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19A0A0A6YYK7 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
TRAV19A0A0A6YYK7 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC25.25■■□□□ 1.63
TRAV19A0A0A6YYK7 AL035685.1-201ENST00000636663 812 ntBASIC25.25■■□□□ 1.63
TRAV19A0A0A6YYK7 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
TRAV19A0A0A6YYK7 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
TRAV19A0A0A6YYK7 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC25.24■■□□□ 1.63
TRAV19A0A0A6YYK7 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC25.24■■□□□ 1.63
TRAV19A0A0A6YYK7 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC25.24■■□□□ 1.63
TRAV19A0A0A6YYK7 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
TRAV19A0A0A6YYK7 RPS2P7-201ENST00000447334 885 ntBASIC25.24■■□□□ 1.63
TRAV19A0A0A6YYK7 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
TRAV19A0A0A6YYK7 MIR4508-201ENST00000584178 70 ntBASIC25.24■■□□□ 1.63
TRAV19A0A0A6YYK7 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
TRAV19A0A0A6YYK7 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
TRAV19A0A0A6YYK7 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.63
TRAV19A0A0A6YYK7 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC25.22■■□□□ 1.63
TRAV19A0A0A6YYK7 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
TRAV19A0A0A6YYK7 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
TRAV19A0A0A6YYK7 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
TRAV19A0A0A6YYK7 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
TRAV19A0A0A6YYK7 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
TRAV19A0A0A6YYK7 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
TRAV19A0A0A6YYK7 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
TRAV19A0A0A6YYK7 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC25.21■■□□□ 1.63
TRAV19A0A0A6YYK7 AC019171.1-201ENST00000601251 1056 ntBASIC25.21■■□□□ 1.63
TRAV19A0A0A6YYK7 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
TRAV19A0A0A6YYK7 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
TRAV19A0A0A6YYK7 AP004609.3-201ENST00000610705 1884 ntBASIC25.21■■□□□ 1.63
TRAV19A0A0A6YYK7 SHF-208ENST00000560734 1731 ntTSL 3 BASIC25.2■■□□□ 1.63
TRAV19A0A0A6YYK7 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
TRAV19A0A0A6YYK7 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC25.2■■□□□ 1.62
TRAV19A0A0A6YYK7 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
TRAV19A0A0A6YYK7 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.62
TRAV19A0A0A6YYK7 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
TRAV19A0A0A6YYK7 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC25.19■■□□□ 1.62
TRAV19A0A0A6YYK7 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC25.19■■□□□ 1.62
TRAV19A0A0A6YYK7 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
TRAV19A0A0A6YYK7 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
TRAV19A0A0A6YYK7 KRT18P10-201ENST00000388836 1287 ntBASIC25.19■■□□□ 1.62
TRAV19A0A0A6YYK7 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC25.19■■□□□ 1.62
TRAV19A0A0A6YYK7 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC25.19■■□□□ 1.62
TRAV19A0A0A6YYK7 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
TRAV19A0A0A6YYK7 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC25.19■■□□□ 1.62
TRAV19A0A0A6YYK7 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
TRAV19A0A0A6YYK7 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
TRAV19A0A0A6YYK7 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC25.18■■□□□ 1.62
TRAV19A0A0A6YYK7 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC25.18■■□□□ 1.62
TRAV19A0A0A6YYK7 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
TRAV19A0A0A6YYK7 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC25.18■■□□□ 1.62
TRAV19A0A0A6YYK7 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
TRAV19A0A0A6YYK7 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
TRAV19A0A0A6YYK7 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
TRAV19A0A0A6YYK7 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC25.17■■□□□ 1.62
TRAV19A0A0A6YYK7 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
TRAV19A0A0A6YYK7 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
TRAV19A0A0A6YYK7 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
TRAV19A0A0A6YYK7 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
TRAV19A0A0A6YYK7 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
TRAV19A0A0A6YYK7 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
TRAV19A0A0A6YYK7 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC25.16■■□□□ 1.62
TRAV19A0A0A6YYK7 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
TRAV19A0A0A6YYK7 TRIR-205ENST00000592273 783 ntTSL 3 BASIC25.15■■□□□ 1.62
TRAV19A0A0A6YYK7 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
TRAV19A0A0A6YYK7 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
TRAV19A0A0A6YYK7 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
TRAV19A0A0A6YYK7 SHF-206ENST00000560471 2499 ntTSL 5 BASIC25.14■■□□□ 1.62
TRAV19A0A0A6YYK7 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC25.14■■□□□ 1.62
TRAV19A0A0A6YYK7 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
TRAV19A0A0A6YYK7 LONRF2P2-201ENST00000439212 571 ntBASIC25.14■■□□□ 1.62
TRAV19A0A0A6YYK7 AC009299.2-201ENST00000482477 511 ntBASIC25.14■■□□□ 1.62
TRAV19A0A0A6YYK7 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
TRAV19A0A0A6YYK7 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC25.13■■□□□ 1.61
TRAV19A0A0A6YYK7 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
TRAV19A0A0A6YYK7 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC25.13■■□□□ 1.61
TRAV19A0A0A6YYK7 AC103724.3-201ENST00000564481 992 ntBASIC25.13■■□□□ 1.61
TRAV19A0A0A6YYK7 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
TRAV19A0A0A6YYK7 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
TRAV19A0A0A6YYK7 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC25.13■■□□□ 1.61
TRAV19A0A0A6YYK7 AL031848.2-201ENST00000607670 837 ntBASIC25.12■■□□□ 1.61
TRAV19A0A0A6YYK7 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC25.12■■□□□ 1.61
TRAV19A0A0A6YYK7 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
TRAV19A0A0A6YYK7 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC25.11■■□□□ 1.61
TRAV19A0A0A6YYK7 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
TRAV19A0A0A6YYK7 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
TRAV19A0A0A6YYK7 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
TRAV19A0A0A6YYK7 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
TRAV19A0A0A6YYK7 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC25.1■■□□□ 1.61
TRAV19A0A0A6YYK7 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
TRAV19A0A0A6YYK7 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
TRAV19A0A0A6YYK7 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
TRAV19A0A0A6YYK7 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
TRAV19A0A0A6YYK7 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
TRAV19A0A0A6YYK7 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.61
TRAV19A0A0A6YYK7 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC25.08■■□□□ 1.61
TRAV19A0A0A6YYK7 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
TRAV19A0A0A6YYK7 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
TRAV19A0A0A6YYK7 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC25.07■■□□□ 1.6
TRAV19A0A0A6YYK7 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
TRAV19A0A0A6YYK7 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
TRAV19A0A0A6YYK7 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms