Protein–RNA interactions for Protein: Q9H0L4

CSTF2T, Cleavage stimulation factor subunit 2 tau variant, humanhuman

Known RBP eCLIP

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2TQ9H0L4 MAP2K3-211ENST00000529517 514 ntTSL 416.41■□□□□ 0.221e-6■■□□□ 11.9
CSTF2TQ9H0L4 IGDCC3-202ENST00000558354 1783 ntAPPRIS ALT2 TSL 516.33■□□□□ 0.29e-8■■□□□ 11.9
CSTF2TQ9H0L4 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.169e-8■■□□□ 11.9
CSTF2TQ9H0L4 ANKMY1-220ENST00000477316 431 ntTSL 513.91□□□□□ -0.181e-6■■□□□ 11.9
CSTF2TQ9H0L4 WSB2-205ENST00000536738 824 ntTSL 326.82■■□□□ 1.884e-7■■□□□ 11.9
CSTF2TQ9H0L4 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC25.14■■□□□ 1.624e-7■■□□□ 11.9
CSTF2TQ9H0L4 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.324e-7■■□□□ 11.9
CSTF2TQ9H0L4 WSB2-207ENST00000540129 1524 ntTSL 1 (best)17.52■□□□□ 0.44e-7■■□□□ 11.9
CSTF2TQ9H0L4 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.47□□□□□ -0.094e-7■■□□□ 11.9
CSTF2TQ9H0L4 WSB2-208ENST00000542726 587 ntTSL 213.66□□□□□ -0.224e-7■■□□□ 11.9
CSTF2TQ9H0L4 WSB2-206ENST00000537945 795 ntTSL 310.8□□□□□ -0.684e-7■■□□□ 11.9
CSTF2TQ9H0L4 WSB2-204ENST00000536602 1008 ntTSL 29.96□□□□□ -0.824e-7■■□□□ 11.9
CSTF2TQ9H0L4 GATS-206ENST00000437485 443 ntTSL 59.72□□□□□ -0.853e-7■■□□□ 11.9
CSTF2TQ9H0L4 WSB2-210ENST00000543218 935 ntTSL 29.52□□□□□ -0.894e-7■■□□□ 11.9
CSTF2TQ9H0L4 GATS-207ENST00000440058 554 ntTSL 29.37□□□□□ -0.913e-7■■□□□ 11.9
CSTF2TQ9H0L4 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.278e-11■■□□□ 11.9
CSTF2TQ9H0L4 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC13.81□□□□□ -0.21e-9■■□□□ 11.9
CSTF2TQ9H0L4 ASNSP1-202ENST00000641079 1352 ntBASIC8.22□□□□□ -1.092e-7■■□□□ 11.9
CSTF2TQ9H0L4 ASNSP1-203ENST00000641735 1372 nt8.22□□□□□ -1.092e-7■■□□□ 11.9
CSTF2TQ9H0L4 ASNSP1-204ENST00000641977 1664 ntBASIC6.04□□□□□ -1.442e-7■■□□□ 11.9
CSTF2TQ9H0L4 ASNSP1-201ENST00000518311 1939 ntBASIC4.68□□□□□ -1.662e-7■■□□□ 11.9
CSTF2TQ9H0L4 ZBED1-204ENST00000461691 947 ntTSL 213.22□□□□□ -0.291e-7■■□□□ 11.9
CSTF2TQ9H0L4 PAM16-213ENST00000575942 806 ntTSL 312.81□□□□□ -0.361e-6■■□□□ 11.9
CSTF2TQ9H0L4 BCAM-209ENST00000590624 991 ntTSL 1 (best)18.63■□□□□ 0.572e-27■■□□□ 11.9
CSTF2TQ9H0L4 AC002480.4-201ENST00000414116 2592 ntTSL 1 (best) BASIC8.45□□□□□ -1.063e-10■■□□□ 11.9
CSTF2TQ9H0L4 RB1-205ENST00000525036 1490 ntTSL 314.38□□□□□ -0.112e-6■■□□□ 11.9
CSTF2TQ9H0L4 RB1-202ENST00000467505 480 ntTSL 1 (best)13.69□□□□□ -0.222e-6■■□□□ 11.9
CSTF2TQ9H0L4 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.342e-6■■□□□ 11.9
CSTF2TQ9H0L4 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.25□□□□□ -0.133e-6■■□□□ 11.9
CSTF2TQ9H0L4 WDR18-210ENST00000591997 577 ntTSL 319.15■□□□□ 0.663e-6■■□□□ 11.9
CSTF2TQ9H0L4 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.33e-6■■□□□ 11.9
CSTF2TQ9H0L4 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.073e-6■■□□□ 11.9
CSTF2TQ9H0L4 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.393e-6■■□□□ 11.9
CSTF2TQ9H0L4 UBE2I-202ENST00000355803 3253 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.423e-6■■□□□ 11.9
CSTF2TQ9H0L4 SPATS2L-227ENST00000619961 6115 ntTSL 2 BASIC7.89□□□□□ -1.155e-12■■□□□ 11.9
CSTF2TQ9H0L4 TANGO2-219ENST00000471707 745 ntTSL 515.45■□□□□ 0.069e-7■■□□□ 11.9
CSTF2TQ9H0L4 TANGO2-223ENST00000484373 3109 ntTSL 411.55□□□□□ -0.569e-7■■□□□ 11.9
CSTF2TQ9H0L4 TCF25-220ENST00000567171 1535 ntTSL 215.49■□□□□ 0.073e-6■■□□□ 11.9
CSTF2TQ9H0L4 MICA-210ENST00000616296 2260 ntTSL 5 BASIC12.14□□□□□ -0.479e-7■■□□□ 11.9
CSTF2TQ9H0L4 HCP5-201ENST00000414046 2658 ntTSL 4 BASIC7.42□□□□□ -1.229e-7■■□□□ 11.9
CSTF2TQ9H0L4 EZH2-205ENST00000476773 2572 ntTSL 2 BASIC9.16□□□□□ -0.941e-6■■□□□ 11.9
CSTF2TQ9H0L4 CBX4-204ENST00000495122 490 ntTSL 314.56□□□□□ -0.085e-7■■□□□ 11.9
CSTF2TQ9H0L4 HLF-202ENST00000430986 1385 ntTSL 2 BASIC11.91□□□□□ -0.51e-7■■□□□ 11.9
CSTF2TQ9H0L4 SCARF1-208ENST00000574545 894 ntTSL 1 (best)18.45■□□□□ 0.541e-6■■□□□ 11.9
CSTF2TQ9H0L4 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.93■□□□□ 0.461e-6■■□□□ 11.9
CSTF2TQ9H0L4 SCARF1-206ENST00000573852 2698 ntTSL 1 (best)17.65■□□□□ 0.421e-6■■□□□ 11.9
CSTF2TQ9H0L4 RPS28-202ENST00000449223 1523 ntTSL 217.46■□□□□ 0.391e-6■■□□□ 11.9
CSTF2TQ9H0L4 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.86■□□□□ 0.291e-6■■□□□ 11.9
CSTF2TQ9H0L4 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.191e-6■■□□□ 11.9
CSTF2TQ9H0L4 MAN1B1-203ENST00000474902 2336 ntTSL 215.01□□□□□ -0.011e-6■■□□□ 11.9
CSTF2TQ9H0L4 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.071e-6■■□□□ 11.9
CSTF2TQ9H0L4 SCARF1-203ENST00000434376 3342 ntTSL 1 (best)14.23□□□□□ -0.131e-6■■□□□ 11.9
CSTF2TQ9H0L4 MAN1B1-209ENST00000536349 5048 ntTSL 214.18□□□□□ -0.141e-6■■□□□ 11.9
CSTF2TQ9H0L4 RPS28-201ENST00000417088 334 ntTSL 214.05□□□□□ -0.161e-6■■□□□ 11.9
CSTF2TQ9H0L4 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.171e-6■■□□□ 11.9
CSTF2TQ9H0L4 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.191e-6■■□□□ 11.9
CSTF2TQ9H0L4 SCARF1-209ENST00000576012 3292 ntTSL 213.84□□□□□ -0.191e-6■■□□□ 11.9
CSTF2TQ9H0L4 MAN1B1-213ENST00000544448 2090 ntTSL 1 (best)13.11□□□□□ -0.311e-6■■□□□ 11.9
CSTF2TQ9H0L4 RPS28-204ENST00000602140 912 ntTSL 1 (best)12.48□□□□□ -0.411e-6■■□□□ 11.9
CSTF2TQ9H0L4 ASPSCR1-217ENST00000583693 3976 ntTSL 211.78□□□□□ -0.524e-21■■□□□ 11.9
CSTF2TQ9H0L4 CD63-212ENST00000552067 621 ntTSL 5 BASIC11.25□□□□□ -0.611e-6■■□□□ 11.9
CSTF2TQ9H0L4 UBE2J2-212ENST00000467339 515 ntTSL 210.26□□□□□ -0.771e-6■■□□□ 11.9
CSTF2TQ9H0L4 CD63-206ENST00000548160 648 ntTSL 2 BASIC8.74□□□□□ -1.011e-6■■□□□ 11.9
CSTF2TQ9H0L4 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC22.23■■□□□ 1.151e-13■■□□□ 11.9
CSTF2TQ9H0L4 HMGA2-207ENST00000537275 1508 ntTSL 1 (best)22.23■■□□□ 1.151e-13■■□□□ 11.9
CSTF2TQ9H0L4 HMGA2-208ENST00000537429 1527 ntTSL 1 (best)22.23■■□□□ 1.151e-13■■□□□ 11.9
CSTF2TQ9H0L4 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.7■■□□□ 1.061e-13■■□□□ 11.9
CSTF2TQ9H0L4 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.31■□□□□ 0.841e-13■■□□□ 11.9
CSTF2TQ9H0L4 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.25■□□□□ 0.831e-13■■□□□ 11.9
CSTF2TQ9H0L4 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.741e-13■■□□□ 11.9
CSTF2TQ9H0L4 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.136e-9■■□□□ 11.9
CSTF2TQ9H0L4 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.021e-13■■□□□ 11.9
CSTF2TQ9H0L4 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.273e-7■■□□□ 11.9
CSTF2TQ9H0L4 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.293e-9■■□□□ 11.9
CSTF2TQ9H0L4 FCHSD2-206ENST00000422375 587 ntTSL 411.68□□□□□ -0.543e-7■■□□□ 11.9
CSTF2TQ9H0L4 SMOC1-202ENST00000381280 3666 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.656e-9■■□□□ 11.9
CSTF2TQ9H0L4 HMGA2-209ENST00000539662 485 ntTSL 39.97□□□□□ -0.811e-13■■□□□ 11.9
CSTF2TQ9H0L4 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC6.78□□□□□ -1.323e-7■■□□□ 11.9
CSTF2TQ9H0L4 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.15□□□□□ -1.433e-7■■□□□ 11.9
CSTF2TQ9H0L4 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.03□□□□□ -1.443e-7■■□□□ 11.9
CSTF2TQ9H0L4 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC6.02□□□□□ -1.443e-7■■□□□ 11.9
CSTF2TQ9H0L4 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.92e-11■■□□□ 11.9
CSTF2TQ9H0L4 GPI-208ENST00000588991 2021 ntTSL 218.43■□□□□ 0.542e-11■■□□□ 11.9
CSTF2TQ9H0L4 PLD1-215ENST00000497307 1506 ntTSL 217.48■□□□□ 0.392e-11■■□□□ 11.9
CSTF2TQ9H0L4 GPI-212ENST00000589985 1516 ntTSL 317.32■□□□□ 0.362e-11■■□□□ 11.9
CSTF2TQ9H0L4 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.15□□□□□ -0.142e-11■■□□□ 11.9
CSTF2TQ9H0L4 HDAC4-205ENST00000454542 565 ntTSL 413.14□□□□□ -0.317e-7■■□□□ 11.9
CSTF2TQ9H0L4 PLD1-205ENST00000440204 646 ntTSL 412.62□□□□□ -0.392e-11■■□□□ 11.9
CSTF2TQ9H0L4 PLD1-207ENST00000460926 1012 ntTSL 29.63□□□□□ -0.872e-11■■□□□ 11.9
CSTF2TQ9H0L4 GPI-202ENST00000415930 4000 ntTSL 2 BASIC7.21□□□□□ -1.262e-11■■□□□ 11.9
CSTF2TQ9H0L4 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.18□□□□□ -1.422e-11■■□□□ 11.9
CSTF2TQ9H0L4 PLD1-216ENST00000498278 996 ntTSL 55.69□□□□□ -1.52e-11■■□□□ 11.9
CSTF2TQ9H0L4 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.622e-11■■□□□ 11.9
CSTF2TQ9H0L4 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.2■□□□□ 0.983e-7■■□□□ 11.9
CSTF2TQ9H0L4 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.33e-7■■□□□ 11.9
CSTF2TQ9H0L4 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.68■□□□□ 0.13e-7■■□□□ 11.9
CSTF2TQ9H0L4 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.193e-7■■□□□ 11.9
CSTF2TQ9H0L4 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.22■□□□□ 0.517e-8■■□□□ 11.9
CSTF2TQ9H0L4 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.337e-8■■□□□ 11.9
CSTF2TQ9H0L4 SREBF2-202ENST00000424354 5699 ntTSL 1 (best)13.21□□□□□ -0.37e-8■■□□□ 11.9
Retrieved 100 of 19,151 protein–RNA pairs in 175.1 ms