RNA–Protein interactions for RNA: ENST00000616296.4

MICA-210, Transcript of MHC class I polypeptide-related sequence A, humanhuman

TSL 5 BASIC

Gene MICA, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MICA-210ENST00000616296 NISCHQ9Y2I1 1504 aa28.69■■■□□ 2.18
MICA-210ENST00000616296 CCDC180Q9P1Z9 1646 aa24.53■■□□□ 1.52
MICA-210ENST00000616296 SHROOM4Q9ULL8 1493 aa24.24■■□□□ 1.47
MICA-210ENST00000616296 ZCCHC6Q5VYS8 1495 aaKnown RBP24.22■■□□□ 1.47
MICA-210ENST00000616296 DCAF8L2P0C7V8 631 aa23.83■■□□□ 1.41
MICA-210ENST00000616296 ABCC9O60706 1549 aa23.8■■□□□ 1.4
MICA-210ENST00000616296 SUPT5HO00267 1087 aaKnown RBP23.62■■□□□ 1.37
MICA-210ENST00000616296 DCAF1Q9Y4B6 1507 aa23.54■■□□□ 1.36
MICA-210ENST00000616296 MYO15BQ96JP2 1530 aa22.96■■□□□ 1.27
MICA-210ENST00000616296 SCRIBQ14160 1630 aa22.95■■□□□ 1.26
MICA-210ENST00000616296 CHIC1Q5VXU3 224 aa22.83■■□□□ 1.25
MICA-210ENST00000616296 NACADO15069 1562 aa22.74■■□□□ 1.23
MICA-210ENST00000616296 RSF1Q96T23 1441 aaPredicted RBP22.59■■□□□ 1.21
MICA-210ENST00000616296 RB1CC1Q8TDY2 1594 aa22.58■■□□□ 1.2
MICA-210ENST00000616296 DNAJC5BQ9UF47 199 aa22.53■■□□□ 1.2
MICA-210ENST00000616296 CECR2Q9BXF3 1484 aa22.4■■□□□ 1.18
MICA-210ENST00000616296 MROH2BQ7Z745 1585 aa22.3■■□□□ 1.16
MICA-210ENST00000616296 PABPN1Q86U42 306 aaKnown RBP eCLIP22.17■■□□□ 1.14
MICA-210ENST00000616296 WIZO95785 1651 aa22.16■■□□□ 1.14
MICA-210ENST00000616296 LOC105371045A0A1W2PR82 267 aa22.14■■□□□ 1.14
MICA-210ENST00000616296 UNC13AQ9UPW8 1703 aa22.1■■□□□ 1.13
MICA-210ENST00000616296 BAZ1AQ9NRL2 1556 aaPredicted RBP22.04■■□□□ 1.12
MICA-210ENST00000616296 TRIM41Q8WV44 630 aa22.01■■□□□ 1.11
MICA-210ENST00000616296 BICRAQ9NZM4 1560 aa21.94■■□□□ 1.1
MICA-210ENST00000616296 SMARCA4P51532 1647 aa21.91■■□□□ 1.1
MICA-210ENST00000616296 FAM9AQ8IZU1 332 aaPredicted RBP21.83■■□□□ 1.09
MICA-210ENST00000616296 TOP2AP11388 1531 aaKnown RBP21.81■■□□□ 1.08
MICA-210ENST00000616296 PCGF6Q9BYE7 350 aa21.8■■□□□ 1.08
MICA-210ENST00000616296 EIF4G1Q04637 1599 aaKnown RBP21.75■■□□□ 1.07
MICA-210ENST00000616296 CCDC88BA6NC98 1476 aa21.7■■□□□ 1.06
MICA-210ENST00000616296 SMARCA2P51531 1590 aa21.68■■□□□ 1.06
MICA-210ENST00000616296 EHMT2Q96KQ7 1210 aa21.66■■□□□ 1.06
MICA-210ENST00000616296 HRCP23327 699 aa21.6■■□□□ 1.05
MICA-210ENST00000616296 ABCC8Q09428 1581 aa21.56■■□□□ 1.04
MICA-210ENST00000616296 PEG3Q9GZU2 1588 aa21.5■■□□□ 1.03
MICA-210ENST00000616296 CC2D2AQ9P2K1 1620 aa21.48■■□□□ 1.03
MICA-210ENST00000616296 TRIM26Q12899 539 aaPredicted RBP21.45■■□□□ 1.02
MICA-210ENST00000616296 ATAD2BQ9ULI0 1458 aa21.42■■□□□ 1.02
MICA-210ENST00000616296 BAZ1BQ9UIG0 1483 aaKnown RBP21.34■■□□□ 1.01
MICA-210ENST00000616296 SOGA1O94964 1423 aa21.29■■□□□ 1
MICA-210ENST00000616296 PPARGC1BQ86YN6 1023 aaKnown RBP21.23■□□□□ 0.99
MICA-210ENST00000616296 WRNQ14191 1432 aaPredicted RBP eCLIP21.22■□□□□ 0.99
MICA-210ENST00000616296 RUSC2Q8N2Y8 1516 aa21.22■□□□□ 0.99
MICA-210ENST00000616296 SYNJ1O43426 1573 aa21.14■□□□□ 0.98
MICA-210ENST00000616296 CSRNP3Q8WYN3 585 aa21.13■□□□□ 0.97
MICA-210ENST00000616296 EEA1Q15075 1411 aa21.12■□□□□ 0.97
MICA-210ENST00000616296 CEP162Q5TB80 1403 aa21.05■□□□□ 0.96
MICA-210ENST00000616296 NCAPD3P42695 1498 aa21.04■□□□□ 0.96
MICA-210ENST00000616296 TNIKQ9UKE5 1360 aa21.04■□□□□ 0.96
MICA-210ENST00000616296 HMGXB3Q12766 1538 aa21.02■□□□□ 0.96
MICA-210ENST00000616296 UBTFP17480 764 aaKnown RBP21.02■□□□□ 0.95
MICA-210ENST00000616296 GOLGA3Q08378 1498 aa20.97■□□□□ 0.95
MICA-210ENST00000616296 TOP2BQ02880 1626 aa20.9■□□□□ 0.94
MICA-210ENST00000616296 TTBK1Q5TCY1 1321 aaPredicted RBP20.89■□□□□ 0.93
MICA-210ENST00000616296 CEP164Q9UPV0 1460 aa20.88■□□□□ 0.93
MICA-210ENST00000616296 KIF21BO75037 1637 aa20.86■□□□□ 0.93
MICA-210ENST00000616296 BIVM-ERCC5R4GMW8 1640 aa20.83■□□□□ 0.93
MICA-210ENST00000616296 ZEB1P37275 1124 aaPredicted RBP20.83■□□□□ 0.92
MICA-210ENST00000616296 DNAJC5Q9H3Z4 198 aa20.81■□□□□ 0.92
MICA-210ENST00000616296 CFTRP13569 1480 aa20.8■□□□□ 0.92
MICA-210ENST00000616296 RAPGEF2Q9Y4G8 1499 aa20.79■□□□□ 0.92
MICA-210ENST00000616296 CUX1P39880 1505 aa20.78■□□□□ 0.92
MICA-210ENST00000616296 CLIP1P30622 1438 aa20.72■□□□□ 0.91
MICA-210ENST00000616296 RANGAP1P46060 587 aaPredicted RBP20.69■□□□□ 0.9
MICA-210ENST00000616296 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.68■□□□□ 0.9
MICA-210ENST00000616296 CADPSQ9ULU8 1353 aa20.62■□□□□ 0.89
MICA-210ENST00000616296 PRXQ9BXM0 1461 aa20.62■□□□□ 0.89
MICA-210ENST00000616296 PRDM2Q13029 1718 aa20.61■□□□□ 0.89
MICA-210ENST00000616296 CUX2O14529 1486 aa20.6■□□□□ 0.89
MICA-210ENST00000616296 VPS8Q8N3P4 1428 aa20.59■□□□□ 0.89
MICA-210ENST00000616296 CCER1Q8TC90 406 aaPredicted RBP20.58■□□□□ 0.89
MICA-210ENST00000616296 KIF27Q86VH2 1401 aa20.58■□□□□ 0.89
MICA-210ENST00000616296 ERICH3Q5RHP9 1530 aa20.57■□□□□ 0.88
MICA-210ENST00000616296 ERCC6Q03468 1493 aa20.56■□□□□ 0.88
MICA-210ENST00000616296 APLP2Q06481 763 aa20.46■□□□□ 0.87
MICA-210ENST00000616296 FGD5Q6ZNL6 1462 aa20.45■□□□□ 0.86
MICA-210ENST00000616296 ARAP1Q96P48 1450 aa20.44■□□□□ 0.86
MICA-210ENST00000616296 FANCD2Q9BXW9 1451 aa20.43■□□□□ 0.86
MICA-210ENST00000616296 NESP48681 1621 aa20.4■□□□□ 0.86
MICA-210ENST00000616296 IGF1RP08069 1367 aa20.4■□□□□ 0.86
MICA-210ENST00000616296 HNRNPUL2Q1KMD3 747 aaKnown RBP20.38■□□□□ 0.85
MICA-210ENST00000616296 ARHGAP35Q9NRY4 1499 aa20.31■□□□□ 0.84
MICA-210ENST00000616296 CARMIL1Q5VZK9 1371 aa20.3■□□□□ 0.84
MICA-210ENST00000616296 DNMBPQ6XZF7 1577 aa20.28■□□□□ 0.84
MICA-210ENST00000616296 RAD54L2Q9Y4B4 1467 aa20.28■□□□□ 0.84
MICA-210ENST00000616296 KANK4Q5T7N3 995 aaPredicted RBP20.28■□□□□ 0.84
MICA-210ENST00000616296 TOPBP1Q92547 1522 aa20.27■□□□□ 0.84
MICA-210ENST00000616296 POLA1P09884 1462 aaPredicted RBP20.24■□□□□ 0.83
MICA-210ENST00000616296 LAMC3Q9Y6N6 1575 aa20.23■□□□□ 0.83
MICA-210ENST00000616296 THOC2Q8NI27 1593 aaKnown RBP20.2■□□□□ 0.82
MICA-210ENST00000616296 ABCA10Q8WWZ4 1543 aa20.19■□□□□ 0.82
MICA-210ENST00000616296 URB2Q14146 1524 aaKnown RBP20.16■□□□□ 0.82
MICA-210ENST00000616296 PDS5BQ9NTI5 1447 aa20.15■□□□□ 0.82
MICA-210ENST00000616296 P3H3Q8IVL6 736 aa20.09■□□□□ 0.81
MICA-210ENST00000616296 KIF21AQ7Z4S6 1674 aa20.08■□□□□ 0.8
MICA-210ENST00000616296 RRBP1Q9P2E9 1410 aaKnown RBP20.06■□□□□ 0.8
MICA-210ENST00000616296 PELP1Q8IZL8 1130 aaKnown RBP20.05■□□□□ 0.8
MICA-210ENST00000616296 TDRD9Q8NDG6 1382 aaKnown RBP20.04■□□□□ 0.8
MICA-210ENST00000616296 WDR97A6NE52 1622 aa20.04■□□□□ 0.8
MICA-210ENST00000616296 TIAM1Q13009 1591 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 244.5 ms