Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.67■□□□□ 0.1
CROCCP3Q8IVE0 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CROCCP3Q8IVE0 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.66■□□□□ 0.1
CROCCP3Q8IVE0 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CROCCP3Q8IVE0 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CROCCP3Q8IVE0 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.66■□□□□ 0.1
CROCCP3Q8IVE0 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CROCCP3Q8IVE0 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CROCCP3Q8IVE0 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CROCCP3Q8IVE0 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC15.66■□□□□ 0.1
CROCCP3Q8IVE0 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CROCCP3Q8IVE0 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CROCCP3Q8IVE0 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CROCCP3Q8IVE0 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CROCCP3Q8IVE0 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CROCCP3Q8IVE0 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CROCCP3Q8IVE0 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CROCCP3Q8IVE0 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CROCCP3Q8IVE0 NIFKP9-201ENST00000419265 221 ntBASIC15.66■□□□□ 0.1
CROCCP3Q8IVE0 PPP1R14BP5-201ENST00000440334 435 ntBASIC15.66■□□□□ 0.1
CROCCP3Q8IVE0 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CROCCP3Q8IVE0 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC15.66■□□□□ 0.1
CROCCP3Q8IVE0 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC15.66■□□□□ 0.1
CROCCP3Q8IVE0 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CROCCP3Q8IVE0 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC15.66■□□□□ 0.1
CROCCP3Q8IVE0 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CROCCP3Q8IVE0 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CROCCP3Q8IVE0 AC116407.2-201ENST00000613639 860 ntBASIC15.66■□□□□ 0.1
CROCCP3Q8IVE0 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC15.66■□□□□ 0.1
CROCCP3Q8IVE0 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.66■□□□□ 0.1
CROCCP3Q8IVE0 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
CROCCP3Q8IVE0 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CROCCP3Q8IVE0 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CROCCP3Q8IVE0 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.66■□□□□ 0.1
CROCCP3Q8IVE0 KRT8P7-201ENST00000533003 1432 ntBASIC15.66■□□□□ 0.1
CROCCP3Q8IVE0 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15.66■□□□□ 0.1
CROCCP3Q8IVE0 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CROCCP3Q8IVE0 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CROCCP3Q8IVE0 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CROCCP3Q8IVE0 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CROCCP3Q8IVE0 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CROCCP3Q8IVE0 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CROCCP3Q8IVE0 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CROCCP3Q8IVE0 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CROCCP3Q8IVE0 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CROCCP3Q8IVE0 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CROCCP3Q8IVE0 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CROCCP3Q8IVE0 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.65■□□□□ 0.1
CROCCP3Q8IVE0 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.65■□□□□ 0.1
CROCCP3Q8IVE0 AC092364.2-201ENST00000596710 2692 ntBASIC15.65■□□□□ 0.1
CROCCP3Q8IVE0 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
CROCCP3Q8IVE0 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.65■□□□□ 0.1
CROCCP3Q8IVE0 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CROCCP3Q8IVE0 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CROCCP3Q8IVE0 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CROCCP3Q8IVE0 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CROCCP3Q8IVE0 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CROCCP3Q8IVE0 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CROCCP3Q8IVE0 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC15.65■□□□□ 0.1
CROCCP3Q8IVE0 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC15.65■□□□□ 0.1
CROCCP3Q8IVE0 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC15.65■□□□□ 0.1
CROCCP3Q8IVE0 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC15.65■□□□□ 0.1
CROCCP3Q8IVE0 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CROCCP3Q8IVE0 AC008622.2-201ENST00000617006 1229 ntBASIC15.65■□□□□ 0.1
CROCCP3Q8IVE0 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC15.65■□□□□ 0.1
CROCCP3Q8IVE0 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.65■□□□□ 0.1
CROCCP3Q8IVE0 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.65■□□□□ 0.1
CROCCP3Q8IVE0 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CROCCP3Q8IVE0 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CROCCP3Q8IVE0 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.65■□□□□ 0.1
CROCCP3Q8IVE0 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CROCCP3Q8IVE0 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CROCCP3Q8IVE0 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CROCCP3Q8IVE0 MTHFR-217ENST00000641820 1569 ntBASIC15.65■□□□□ 0.1
CROCCP3Q8IVE0 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CROCCP3Q8IVE0 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.65■□□□□ 0.1
CROCCP3Q8IVE0 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CROCCP3Q8IVE0 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CROCCP3Q8IVE0 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.65■□□□□ 0.1
CROCCP3Q8IVE0 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CROCCP3Q8IVE0 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.65■□□□□ 0.1
CROCCP3Q8IVE0 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CROCCP3Q8IVE0 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.1
CROCCP3Q8IVE0 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
CROCCP3Q8IVE0 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
CROCCP3Q8IVE0 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CROCCP3Q8IVE0 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CROCCP3Q8IVE0 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CROCCP3Q8IVE0 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CROCCP3Q8IVE0 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
CROCCP3Q8IVE0 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CROCCP3Q8IVE0 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CROCCP3Q8IVE0 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CROCCP3Q8IVE0 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CROCCP3Q8IVE0 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CROCCP3Q8IVE0 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CROCCP3Q8IVE0 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CROCCP3Q8IVE0 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CROCCP3Q8IVE0 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CROCCP3Q8IVE0 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms