Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CNTNAP1P78357 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CNTNAP1P78357 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
CNTNAP1P78357 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
CNTNAP1P78357 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
CNTNAP1P78357 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC20.33■□□□□ 0.84
CNTNAP1P78357 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CNTNAP1P78357 AL133338.1-201ENST00000565695 1517 ntBASIC20.33■□□□□ 0.84
CNTNAP1P78357 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC20.33■□□□□ 0.84
CNTNAP1P78357 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC20.33■□□□□ 0.84
CNTNAP1P78357 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CNTNAP1P78357 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC20.33■□□□□ 0.84
CNTNAP1P78357 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC20.33■□□□□ 0.84
CNTNAP1P78357 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC20.33■□□□□ 0.84
CNTNAP1P78357 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC20.33■□□□□ 0.84
CNTNAP1P78357 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC20.33■□□□□ 0.84
CNTNAP1P78357 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC20.33■□□□□ 0.84
CNTNAP1P78357 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.84
CNTNAP1P78357 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CNTNAP1P78357 AL162274.1-201ENST00000617191 1098 ntBASIC20.33■□□□□ 0.84
CNTNAP1P78357 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.33■□□□□ 0.84
CNTNAP1P78357 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNTNAP1P78357 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CNTNAP1P78357 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CNTNAP1P78357 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNTNAP1P78357 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNTNAP1P78357 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CNTNAP1P78357 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
CNTNAP1P78357 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNTNAP1P78357 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNTNAP1P78357 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNTNAP1P78357 AC138969.3-201ENST00000546612 1459 ntBASIC20.32■□□□□ 0.84
CNTNAP1P78357 AC138932.2-201ENST00000548268 1459 ntBASIC20.32■□□□□ 0.84
CNTNAP1P78357 AC126755.4-201ENST00000549796 1459 ntBASIC20.32■□□□□ 0.84
CNTNAP1P78357 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CNTNAP1P78357 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC20.32■□□□□ 0.84
CNTNAP1P78357 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CNTNAP1P78357 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC20.32■□□□□ 0.84
CNTNAP1P78357 GALT-202ENST00000450095 1280 ntTSL 2 BASIC20.32■□□□□ 0.84
CNTNAP1P78357 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC20.32■□□□□ 0.84
CNTNAP1P78357 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
CNTNAP1P78357 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CNTNAP1P78357 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC20.32■□□□□ 0.84
CNTNAP1P78357 THTPA-204ENST00000554970 569 ntTSL 4 BASIC20.32■□□□□ 0.84
CNTNAP1P78357 THTPA-206ENST00000556015 535 ntTSL 3 BASIC20.32■□□□□ 0.84
CNTNAP1P78357 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC20.32■□□□□ 0.84
CNTNAP1P78357 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC20.32■□□□□ 0.84
CNTNAP1P78357 IGHV3-72-202ENST00000621503 303 ntBASIC20.32■□□□□ 0.84
CNTNAP1P78357 AL645728.2-201ENST00000641974 660 ntBASIC20.32■□□□□ 0.84
CNTNAP1P78357 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNTNAP1P78357 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CNTNAP1P78357 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CNTNAP1P78357 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC20.31■□□□□ 0.84
CNTNAP1P78357 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.31■□□□□ 0.84
CNTNAP1P78357 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC20.31■□□□□ 0.84
CNTNAP1P78357 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CNTNAP1P78357 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC20.31■□□□□ 0.84
CNTNAP1P78357 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.31■□□□□ 0.84
CNTNAP1P78357 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CNTNAP1P78357 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CNTNAP1P78357 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CNTNAP1P78357 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.31■□□□□ 0.84
CNTNAP1P78357 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CNTNAP1P78357 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CNTNAP1P78357 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CNTNAP1P78357 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CNTNAP1P78357 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CNTNAP1P78357 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CNTNAP1P78357 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CNTNAP1P78357 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC20.31■□□□□ 0.84
CNTNAP1P78357 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CNTNAP1P78357 SSH2-210ENST00000582084 560 ntTSL 3 BASIC20.31■□□□□ 0.84
CNTNAP1P78357 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC20.31■□□□□ 0.84
CNTNAP1P78357 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC20.31■□□□□ 0.84
CNTNAP1P78357 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CNTNAP1P78357 AC004408.2-201ENST00000623613 2777 ntBASIC20.31■□□□□ 0.84
CNTNAP1P78357 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
CNTNAP1P78357 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CNTNAP1P78357 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CNTNAP1P78357 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CNTNAP1P78357 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.3■□□□□ 0.84
CNTNAP1P78357 LYSMD4-203ENST00000378904 2122 ntBASIC20.3■□□□□ 0.84
CNTNAP1P78357 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC20.3■□□□□ 0.84
CNTNAP1P78357 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CNTNAP1P78357 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CNTNAP1P78357 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CNTNAP1P78357 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CNTNAP1P78357 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CNTNAP1P78357 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CNTNAP1P78357 TSSK5P-201ENST00000423978 907 ntBASIC20.3■□□□□ 0.84
CNTNAP1P78357 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CNTNAP1P78357 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC20.3■□□□□ 0.84
CNTNAP1P78357 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CNTNAP1P78357 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC20.3■□□□□ 0.84
CNTNAP1P78357 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
CNTNAP1P78357 GATD1-206ENST00000526325 756 ntTSL 5 BASIC20.3■□□□□ 0.84
CNTNAP1P78357 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC20.3■□□□□ 0.84
CNTNAP1P78357 CDK4-206ENST00000549606 558 ntTSL 2 BASIC20.3■□□□□ 0.84
CNTNAP1P78357 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CNTNAP1P78357 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms