Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
HMGA2P52926 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
HMGA2P52926 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
HMGA2P52926 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.73■□□□□ 0.11
HMGA2P52926 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HMGA2P52926 AC132938.5-201ENST00000624980 1813 ntBASIC15.73■□□□□ 0.11
HMGA2P52926 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC15.73■□□□□ 0.11
HMGA2P52926 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
HMGA2P52926 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HMGA2P52926 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HMGA2P52926 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
HMGA2P52926 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.73■□□□□ 0.11
HMGA2P52926 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HMGA2P52926 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HMGA2P52926 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HMGA2P52926 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
HMGA2P52926 AC003669.1-201ENST00000334569 611 ntBASIC15.73■□□□□ 0.11
HMGA2P52926 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HMGA2P52926 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.73■□□□□ 0.11
HMGA2P52926 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
HMGA2P52926 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HMGA2P52926 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC15.73■□□□□ 0.11
HMGA2P52926 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC15.73■□□□□ 0.11
HMGA2P52926 MEG3-211ENST00000452514 461 ntTSL 3 BASIC15.73■□□□□ 0.11
HMGA2P52926 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HMGA2P52926 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC15.73■□□□□ 0.11
HMGA2P52926 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
HMGA2P52926 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HMGA2P52926 AC097493.4-201ENST00000641197 219 ntBASIC15.73■□□□□ 0.11
HMGA2P52926 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.73■□□□□ 0.11
HMGA2P52926 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HMGA2P52926 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HMGA2P52926 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.73■□□□□ 0.11
HMGA2P52926 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
HMGA2P52926 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HMGA2P52926 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HMGA2P52926 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
HMGA2P52926 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HMGA2P52926 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
HMGA2P52926 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HMGA2P52926 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.73■□□□□ 0.11
HMGA2P52926 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
HMGA2P52926 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HMGA2P52926 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.72■□□□□ 0.11
HMGA2P52926 AL662844.4-201ENST00000606367 2838 ntBASIC15.72■□□□□ 0.11
HMGA2P52926 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.72■□□□□ 0.11
HMGA2P52926 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HMGA2P52926 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
HMGA2P52926 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HMGA2P52926 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HMGA2P52926 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.72■□□□□ 0.11
HMGA2P52926 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.72■□□□□ 0.11
HMGA2P52926 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
HMGA2P52926 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HMGA2P52926 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HMGA2P52926 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.72■□□□□ 0.11
HMGA2P52926 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HMGA2P52926 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
HMGA2P52926 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
HMGA2P52926 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
HMGA2P52926 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.72■□□□□ 0.11
HMGA2P52926 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HMGA2P52926 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HMGA2P52926 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
HMGA2P52926 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.72■□□□□ 0.11
HMGA2P52926 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC15.72■□□□□ 0.11
HMGA2P52926 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HMGA2P52926 AC124864.1-201ENST00000623408 392 ntBASIC15.72■□□□□ 0.11
HMGA2P52926 VPS72-207ENST00000640458 689 ntTSL 5 BASIC15.72■□□□□ 0.11
HMGA2P52926 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
HMGA2P52926 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
HMGA2P52926 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
HMGA2P52926 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.72■□□□□ 0.11
HMGA2P52926 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.72■□□□□ 0.11
HMGA2P52926 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HMGA2P52926 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HMGA2P52926 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HMGA2P52926 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HMGA2P52926 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HMGA2P52926 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HMGA2P52926 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HMGA2P52926 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
HMGA2P52926 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
HMGA2P52926 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.72■□□□□ 0.11
HMGA2P52926 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.71■□□□□ 0.11
HMGA2P52926 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HMGA2P52926 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
HMGA2P52926 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HMGA2P52926 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HMGA2P52926 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HMGA2P52926 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HMGA2P52926 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.71■□□□□ 0.11
HMGA2P52926 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HMGA2P52926 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HMGA2P52926 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.71■□□□□ 0.11
HMGA2P52926 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
HMGA2P52926 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HMGA2P52926 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HMGA2P52926 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
HMGA2P52926 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms