Protein–RNA interactions for Protein: O95977

S1PR4, Sphingosine 1-phosphate receptor 4, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR4O95977 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
S1PR4O95977 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
S1PR4O95977 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
S1PR4O95977 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
S1PR4O95977 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
S1PR4O95977 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
S1PR4O95977 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
S1PR4O95977 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
S1PR4O95977 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.12■□□□□ 0.33
S1PR4O95977 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.12■□□□□ 0.33
S1PR4O95977 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.12■□□□□ 0.33
S1PR4O95977 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.12■□□□□ 0.33
S1PR4O95977 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
S1PR4O95977 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
S1PR4O95977 AP001002.2-201ENST00000625137 386 ntBASIC17.12■□□□□ 0.33
S1PR4O95977 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.12■□□□□ 0.33
S1PR4O95977 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
S1PR4O95977 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
S1PR4O95977 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
S1PR4O95977 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
S1PR4O95977 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
S1PR4O95977 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
S1PR4O95977 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
S1PR4O95977 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.12■□□□□ 0.33
S1PR4O95977 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
S1PR4O95977 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.12■□□□□ 0.33
S1PR4O95977 AC097637.2-201ENST00000624096 1997 ntBASIC17.11■□□□□ 0.33
S1PR4O95977 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
S1PR4O95977 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
S1PR4O95977 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
S1PR4O95977 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.11■□□□□ 0.33
S1PR4O95977 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
S1PR4O95977 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
S1PR4O95977 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
S1PR4O95977 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
S1PR4O95977 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
S1PR4O95977 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
S1PR4O95977 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
S1PR4O95977 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
S1PR4O95977 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.11■□□□□ 0.33
S1PR4O95977 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.11■□□□□ 0.33
S1PR4O95977 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
S1PR4O95977 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
S1PR4O95977 AL450487.1-201ENST00000426799 995 ntBASIC17.11■□□□□ 0.33
S1PR4O95977 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.11■□□□□ 0.33
S1PR4O95977 AC098799.1-201ENST00000504752 800 ntBASIC17.11■□□□□ 0.33
S1PR4O95977 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
S1PR4O95977 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.11■□□□□ 0.33
S1PR4O95977 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.11■□□□□ 0.33
S1PR4O95977 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.11■□□□□ 0.33
S1PR4O95977 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC17.11■□□□□ 0.33
S1PR4O95977 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
S1PR4O95977 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
S1PR4O95977 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.11■□□□□ 0.33
S1PR4O95977 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
S1PR4O95977 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
S1PR4O95977 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
S1PR4O95977 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
S1PR4O95977 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
S1PR4O95977 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
S1PR4O95977 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.1■□□□□ 0.33
S1PR4O95977 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.1■□□□□ 0.33
S1PR4O95977 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
S1PR4O95977 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.1■□□□□ 0.33
S1PR4O95977 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
S1PR4O95977 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
S1PR4O95977 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
S1PR4O95977 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
S1PR4O95977 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
S1PR4O95977 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
S1PR4O95977 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
S1PR4O95977 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
S1PR4O95977 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.1■□□□□ 0.33
S1PR4O95977 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.1■□□□□ 0.33
S1PR4O95977 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.1■□□□□ 0.33
S1PR4O95977 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.1■□□□□ 0.33
S1PR4O95977 AC106795.1-205ENST00000512851 1056 ntBASIC17.1■□□□□ 0.33
S1PR4O95977 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
S1PR4O95977 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.1■□□□□ 0.33
S1PR4O95977 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.1■□□□□ 0.33
S1PR4O95977 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
S1PR4O95977 AL732292.2-201ENST00000609649 430 ntBASIC17.1■□□□□ 0.33
S1PR4O95977 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.1■□□□□ 0.33
S1PR4O95977 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
S1PR4O95977 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
S1PR4O95977 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
S1PR4O95977 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.1■□□□□ 0.33
S1PR4O95977 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.1■□□□□ 0.33
S1PR4O95977 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
S1PR4O95977 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
S1PR4O95977 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
S1PR4O95977 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
S1PR4O95977 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
S1PR4O95977 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
S1PR4O95977 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
S1PR4O95977 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
S1PR4O95977 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
S1PR4O95977 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
S1PR4O95977 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
S1PR4O95977 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms