Protein–RNA interactions for Protein: Q9H0L4

CSTF2T, Cleavage stimulation factor subunit 2 tau variant, humanhuman

Known RBP eCLIP

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2TQ9H0L4 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.381e-6■■□□□ 12
CSTF2TQ9H0L4 LRCH1-204ENST00000443945 2070 ntTSL 1 (best)16.87■□□□□ 0.291e-6■■□□□ 12
CSTF2TQ9H0L4 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.11e-6■■□□□ 12
CSTF2TQ9H0L4 LRCH1-203ENST00000389798 4131 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.541e-6■■□□□ 12
CSTF2TQ9H0L4 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.46e-8■■□□□ 12
CSTF2TQ9H0L4 AGAP3-225ENST00000498559 581 ntTSL 216.92■□□□□ 0.34e-8■■□□□ 12
CSTF2TQ9H0L4 AGAP3-213ENST00000475145 413 ntTSL 210.89□□□□□ -0.674e-8■■□□□ 12
CSTF2TQ9H0L4 AMFR-206ENST00000565445 803 ntTSL 519.91■□□□□ 0.783e-7■■□□□ 12
CSTF2TQ9H0L4 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.183e-7■■□□□ 12
CSTF2TQ9H0L4 AMFR-204ENST00000563664 567 ntTSL 49.18□□□□□ -0.943e-7■■□□□ 12
CSTF2TQ9H0L4 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.26■□□□□ 0.672e-6■■□□□ 12
CSTF2TQ9H0L4 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.15□□□□□ -1.751e-6■■□□□ 12
CSTF2TQ9H0L4 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.921e-6■■□□□ 12
CSTF2TQ9H0L4 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.663e-6■■□□□ 12
CSTF2TQ9H0L4 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.173e-6■■□□□ 12
CSTF2TQ9H0L4 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.15■□□□□ 0.983e-6■■□□□ 12
CSTF2TQ9H0L4 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.963e-6■■□□□ 12
CSTF2TQ9H0L4 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.873e-6■■□□□ 12
CSTF2TQ9H0L4 RUNX1-204ENST00000399237 822 ntTSL 520.02■□□□□ 0.82e-6■■□□□ 12
CSTF2TQ9H0L4 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.53e-6■■□□□ 12
CSTF2TQ9H0L4 FAM120C-204ENST00000497680 637 ntTSL 217.78■□□□□ 0.443e-6■■□□□ 12
CSTF2TQ9H0L4 RUNX1-208ENST00000455571 610 ntTSL 317.1■□□□□ 0.332e-6■■□□□ 12
CSTF2TQ9H0L4 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.283e-6■■□□□ 12
CSTF2TQ9H0L4 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.263e-6■■□□□ 12
CSTF2TQ9H0L4 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.78■□□□□ 0.123e-6■■□□□ 12
CSTF2TQ9H0L4 SH3BP4-210ENST00000489601 638 ntTSL 215.71■□□□□ 0.113e-6■■□□□ 12
CSTF2TQ9H0L4 ZNF710-204ENST00000559419 332 ntTSL 315.36■□□□□ 0.051e-11■■□□□ 12
CSTF2TQ9H0L4 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.043e-6■■□□□ 12
CSTF2TQ9H0L4 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.053e-6■■□□□ 12
CSTF2TQ9H0L4 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.51□□□□□ -0.093e-6■■□□□ 12
CSTF2TQ9H0L4 ILF3-221ENST00000591649 2579 ntTSL 213.76□□□□□ -0.213e-6■■□□□ 12
CSTF2TQ9H0L4 SERGEF-209ENST00000528369 559 ntTSL 313.43□□□□□ -0.263e-6■■□□□ 12
CSTF2TQ9H0L4 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.333e-6■■□□□ 12
CSTF2TQ9H0L4 DOT1L-205ENST00000478937 638 ntTSL 312.61□□□□□ -0.393e-6■■□□□ 12
CSTF2TQ9H0L4 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.415e-8■■□□□ 12
CSTF2TQ9H0L4 PTPRK-207ENST00000368226 6087 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.415e-8■■□□□ 12
CSTF2TQ9H0L4 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.433e-6■■□□□ 12
CSTF2TQ9H0L4 AC011481.3-201ENST00000623895 5594 ntBASIC12.35□□□□□ -0.433e-6■■□□□ 12
CSTF2TQ9H0L4 SERGEF-210ENST00000529151 898 ntTSL 312.3□□□□□ -0.443e-6■■□□□ 12
CSTF2TQ9H0L4 SERGEF-211ENST00000529440 439 ntTSL 212.3□□□□□ -0.443e-6■■□□□ 12
CSTF2TQ9H0L4 ILF3-219ENST00000590261 3219 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.473e-6■■□□□ 12
CSTF2TQ9H0L4 ILF3-220ENST00000590869 531 ntTSL 512.09□□□□□ -0.473e-6■■□□□ 12
CSTF2TQ9H0L4 TCEA3-204ENST00000461794 713 ntTSL 3 BASIC11.77□□□□□ -0.531e-11■■□□□ 12
CSTF2TQ9H0L4 SERGEF-221ENST00000532546 833 ntTSL 311.74□□□□□ -0.533e-6■■□□□ 12
CSTF2TQ9H0L4 PTPRK-203ENST00000368207 4758 ntTSL 5 BASIC11.6□□□□□ -0.555e-8■■□□□ 12
CSTF2TQ9H0L4 PTPRK-221ENST00000532331 5757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.645e-8■■□□□ 12
CSTF2TQ9H0L4 SERGEF-206ENST00000525920 497 ntTSL 310.85□□□□□ -0.673e-6■■□□□ 12
CSTF2TQ9H0L4 IPO13-202ENST00000372343 3894 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.683e-6■■□□□ 12
CSTF2TQ9H0L4 EGFR-211ENST00000638463 4735 ntTSL 5 BASIC10.75□□□□□ -0.693e-6■■□□□ 12
CSTF2TQ9H0L4 PTPRK-205ENST00000368213 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.715e-8■■□□□ 12
CSTF2TQ9H0L4 PTPRK-216ENST00000524481 3157 ntTSL 210.51□□□□□ -0.735e-8■■□□□ 12
CSTF2TQ9H0L4 D2HGDH-216ENST00000496252 496 ntTSL 410.38□□□□□ -0.753e-6■■□□□ 12
CSTF2TQ9H0L4 ILF3-208ENST00000587928 4230 ntTSL 210.34□□□□□ -0.753e-6■■□□□ 12
CSTF2TQ9H0L4 FAT1-201ENST00000441802 14786 ntAPPRIS P2 TSL 5 BASIC8.68□□□□□ -1.023e-6■■□□□ 12
CSTF2TQ9H0L4 GFOD1-201ENST00000379278 1529 ntTSL 1 (best)8.42□□□□□ -1.063e-6■■□□□ 12
CSTF2TQ9H0L4 FAT1-212ENST00000614102 14758 ntAPPRIS ALT1 TSL 5 BASIC7.84□□□□□ -1.153e-6■■□□□ 12
CSTF2TQ9H0L4 PTPRK-206ENST00000368215 4651 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.175e-8■■□□□ 12
CSTF2TQ9H0L4 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.273e-6■■□□□ 12
CSTF2TQ9H0L4 SERGEF-222ENST00000533241 539 ntTSL 46.68□□□□□ -1.343e-6■■□□□ 12
CSTF2TQ9H0L4 TCEA3-202ENST00000374602 575 ntTSL 36.18□□□□□ -1.421e-11■■□□□ 12
CSTF2TQ9H0L4 RALY-209ENST00000489384 227 ntTSL 36.09□□□□□ -1.433e-6■■□□□ 12
CSTF2TQ9H0L4 SERGEF-204ENST00000525168 342 ntTSL 35.86□□□□□ -1.473e-6■■□□□ 12
CSTF2TQ9H0L4 D2HGDH-209ENST00000454048 234 ntTSL 53.93□□□□□ -1.783e-6■■□□□ 12
CSTF2TQ9H0L4 SMG1P3-202ENST00000437413 589 ntTSL 420.31■□□□□ 0.844e-7■■□□□ 12
CSTF2TQ9H0L4 SMG1P3-201ENST00000435197 416 ntTSL 317.19■□□□□ 0.344e-7■■□□□ 12
CSTF2TQ9H0L4 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15□□□□□ -0.014e-7■■□□□ 12
CSTF2TQ9H0L4 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.315e-11■■□□□ 12
CSTF2TQ9H0L4 MICALL2-213ENST00000490608 631 ntTSL 213.92□□□□□ -0.187e-9■■□□□ 12
CSTF2TQ9H0L4 CSDE1-215ENST00000533818 552 ntTSL 410.25□□□□□ -0.773e-6■■□□□ 12
CSTF2TQ9H0L4 CSDE1-217ENST00000534699 2667 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.853e-6■■□□□ 12
CSTF2TQ9H0L4 CSDE1-214ENST00000530886 3459 ntTSL 5 BASIC8.14□□□□□ -1.113e-6■■□□□ 12
CSTF2TQ9H0L4 CSDE1-210ENST00000525878 626 ntTSL 47.62□□□□□ -1.193e-6■■□□□ 12
CSTF2TQ9H0L4 CSDE1-212ENST00000529046 571 ntTSL 47.36□□□□□ -1.233e-6■■□□□ 12
CSTF2TQ9H0L4 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC7.06□□□□□ -1.283e-6■■□□□ 12
CSTF2TQ9H0L4 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC6.84□□□□□ -1.313e-6■■□□□ 12
CSTF2TQ9H0L4 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC6.69□□□□□ -1.343e-6■■□□□ 12
CSTF2TQ9H0L4 CSDE1-211ENST00000525970 503 ntTSL 46.55□□□□□ -1.363e-6■■□□□ 12
CSTF2TQ9H0L4 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.433e-6■■□□□ 12
CSTF2TQ9H0L4 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.55□□□□□ -1.523e-6■■□□□ 12
CSTF2TQ9H0L4 CSDE1-208ENST00000524652 562 ntTSL 45.01□□□□□ -1.613e-6■■□□□ 12
CSTF2TQ9H0L4 CSDE1-209ENST00000525132 521 ntTSL 54.08□□□□□ -1.763e-6■■□□□ 12
CSTF2TQ9H0L4 PHYKPL-211ENST00000494126 2297 ntTSL 1 (best)21.96■■□□□ 1.114e-6■■□□□ 12
CSTF2TQ9H0L4 PHYKPL-204ENST00000474052 1539 ntTSL 1 (best)21.68■■□□□ 1.064e-6■■□□□ 12
CSTF2TQ9H0L4 PHYKPL-209ENST00000489262 2780 ntTSL 219.81■□□□□ 0.764e-6■■□□□ 12
CSTF2TQ9H0L4 PHYKPL-210ENST00000493197 1969 ntTSL 217.04■□□□□ 0.324e-6■■□□□ 12
CSTF2TQ9H0L4 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.264e-6■■□□□ 12
CSTF2TQ9H0L4 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.182e-9■■□□□ 12
CSTF2TQ9H0L4 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.364e-6■■□□□ 12
CSTF2TQ9H0L4 ADD3-212ENST00000486014 317 ntTSL 36.41□□□□□ -1.384e-6■■□□□ 12
CSTF2TQ9H0L4 DRAM2-202ENST00000461449 611 ntTSL 36.12□□□□□ -1.434e-6■■□□□ 12
CSTF2TQ9H0L4 ADD3-216ENST00000488837 590 ntTSL 34.54□□□□□ -1.684e-6■■□□□ 12
CSTF2TQ9H0L4 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.759e-9■■□□□ 12
CSTF2TQ9H0L4 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.339e-9■■□□□ 12
CSTF2TQ9H0L4 SERPINF2-204ENST00000453066 842 ntTSL 516.14■□□□□ 0.179e-9■■□□□ 12
CSTF2TQ9H0L4 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.78□□□□□ -0.049e-9■■□□□ 12
CSTF2TQ9H0L4 SERPINF2-205ENST00000453723 838 ntTSL 313.89□□□□□ -0.199e-9■■□□□ 12
CSTF2TQ9H0L4 CENPC-201ENST00000273853 6940 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.864e-6■■□□□ 11.9
CSTF2TQ9H0L4 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.263e-7■■□□□ 11.9
CSTF2TQ9H0L4 HNRNPU-202ENST00000366525 2851 ntTSL 59.56□□□□□ -0.881e-7■■□□□ 11.9
CSTF2TQ9H0L4 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.7■□□□□ 0.261e-6■■□□□ 11.9
Retrieved 100 of 19,151 protein–RNA pairs in 169.9 ms