RNA–Protein interactions for RNA: ENST00000372343.7

IPO13-202, Transcript of importin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IPO13, Length 3,894 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IPO13-202ENST00000372343 NISCHQ9Y2I1 1504 aa22.49■■□□□ 1.19
IPO13-202ENST00000372343 SHROOM4Q9ULL8 1493 aa20.01■□□□□ 0.79
IPO13-202ENST00000372343 SUPT5HO00267 1087 aaKnown RBP19.9■□□□□ 0.78
IPO13-202ENST00000372343 DCAF8L2P0C7V8 631 aa19.62■□□□□ 0.73
IPO13-202ENST00000372343 CHIC1Q5VXU3 224 aa19.1■□□□□ 0.65
IPO13-202ENST00000372343 PCGF6Q9BYE7 350 aa19.09■□□□□ 0.65
IPO13-202ENST00000372343 HRCP23327 699 aa19.02■□□□□ 0.64
IPO13-202ENST00000372343 ZCCHC6Q5VYS8 1495 aaKnown RBP18.98■□□□□ 0.63
IPO13-202ENST00000372343 MYO15BQ96JP2 1530 aa18.78■□□□□ 0.6
IPO13-202ENST00000372343 LOC105371045A0A1W2PR82 267 aa18.72■□□□□ 0.59
IPO13-202ENST00000372343 CCDC180Q9P1Z9 1646 aa18.7■□□□□ 0.58
IPO13-202ENST00000372343 PPARGC1BQ86YN6 1023 aaKnown RBP18.68■□□□□ 0.58
IPO13-202ENST00000372343 TRIM26Q12899 539 aaPredicted RBP18.51■□□□□ 0.55
IPO13-202ENST00000372343 EHMT2Q96KQ7 1210 aa18.49■□□□□ 0.55
IPO13-202ENST00000372343 FAM9AQ8IZU1 332 aaPredicted RBP18.48■□□□□ 0.55
IPO13-202ENST00000372343 TRIM41Q8WV44 630 aa18.44■□□□□ 0.54
IPO13-202ENST00000372343 DCAF1Q9Y4B6 1507 aa18.39■□□□□ 0.53
IPO13-202ENST00000372343 ZEB1P37275 1124 aaPredicted RBP18.32■□□□□ 0.52
IPO13-202ENST00000372343 RSF1Q96T23 1441 aaPredicted RBP18.01■□□□□ 0.47
IPO13-202ENST00000372343 SCRIBQ14160 1630 aa17.99■□□□□ 0.47
IPO13-202ENST00000372343 CCER1Q8TC90 406 aaPredicted RBP17.96■□□□□ 0.47
IPO13-202ENST00000372343 TTBK1Q5TCY1 1321 aaPredicted RBP17.93■□□□□ 0.46
IPO13-202ENST00000372343 ABCC9O60706 1549 aa17.9■□□□□ 0.46
IPO13-202ENST00000372343 PELP1Q8IZL8 1130 aaKnown RBP17.86■□□□□ 0.45
IPO13-202ENST00000372343 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.84■□□□□ 0.45
IPO13-202ENST00000372343 RB1CC1Q8TDY2 1594 aa17.75■□□□□ 0.43
IPO13-202ENST00000372343 CENPBP07199 599 aaPredicted RBP17.68■□□□□ 0.42
IPO13-202ENST00000372343 UBTFP17480 764 aaKnown RBP17.67■□□□□ 0.42
IPO13-202ENST00000372343 SCAF1Q9H7N4 1312 aaKnown RBP17.67■□□□□ 0.42
IPO13-202ENST00000372343 CECR2Q9BXF3 1484 aa17.64■□□□□ 0.41
IPO13-202ENST00000372343 DIEXFQ68CQ4 756 aaKnown RBP17.6■□□□□ 0.41
IPO13-202ENST00000372343 MROH2BQ7Z745 1585 aa17.53■□□□□ 0.4
IPO13-202ENST00000372343 ACIN1Q9UKV3 1341 aaKnown RBP17.52■□□□□ 0.4
IPO13-202ENST00000372343 APLP2Q06481 763 aa17.49■□□□□ 0.39
IPO13-202ENST00000372343 NACADO15069 1562 aa17.47■□□□□ 0.39
IPO13-202ENST00000372343 YTHDC1Q96MU7 727 aaKnown RBP17.46■□□□□ 0.39
IPO13-202ENST00000372343 NEUROD1Q13562 356 aa17.45■□□□□ 0.38
IPO13-202ENST00000372343 GTF3C3Q9Y5Q9 886 aa17.45■□□□□ 0.38
IPO13-202ENST00000372343 RANGAP1P46060 587 aaPredicted RBP17.44■□□□□ 0.38
IPO13-202ENST00000372343 CSRNP3Q8WYN3 585 aa17.41■□□□□ 0.38
IPO13-202ENST00000372343 HNRNPUL2Q1KMD3 747 aaKnown RBP17.41■□□□□ 0.38
IPO13-202ENST00000372343 WIZO95785 1651 aa17.39■□□□□ 0.37
IPO13-202ENST00000372343 ZNF316A6NFI3 1004 aaPredicted RBP17.34■□□□□ 0.37
IPO13-202ENST00000372343 CEP162Q5TB80 1403 aa17.33■□□□□ 0.36
IPO13-202ENST00000372343 BAZ1AQ9NRL2 1556 aaPredicted RBP17.3■□□□□ 0.36
IPO13-202ENST00000372343 PABPN1Q86U42 306 aaKnown RBP eCLIP17.26■□□□□ 0.35
IPO13-202ENST00000372343 CCDC88BA6NC98 1476 aa17.26■□□□□ 0.35
IPO13-202ENST00000372343 ABCC8Q09428 1581 aa17.25■□□□□ 0.35
IPO13-202ENST00000372343 TNIKQ9UKE5 1360 aa17.24■□□□□ 0.35
IPO13-202ENST00000372343 SOGA1O94964 1423 aa17.24■□□□□ 0.35
IPO13-202ENST00000372343 EEA1Q15075 1411 aa17.17■□□□□ 0.34
IPO13-202ENST00000372343 WRNQ14191 1432 aaPredicted RBP eCLIP17.15■□□□□ 0.34
IPO13-202ENST00000372343 TOP2AP11388 1531 aaKnown RBP17.12■□□□□ 0.33
IPO13-202ENST00000372343 GOLGA3Q08378 1498 aa17.12■□□□□ 0.33
IPO13-202ENST00000372343 MIER1Q8N108 512 aa17.09■□□□□ 0.33
IPO13-202ENST00000372343 MYT1Q01538 1121 aa17.08■□□□□ 0.33
IPO13-202ENST00000372343 RUSC2Q8N2Y8 1516 aa17.06■□□□□ 0.32
IPO13-202ENST00000372343 CLIP1P30622 1438 aa17.05■□□□□ 0.32
IPO13-202ENST00000372343 SMARCA4P51532 1647 aa17■□□□□ 0.31
IPO13-202ENST00000372343 SMARCA2P51531 1590 aa16.99■□□□□ 0.31
IPO13-202ENST00000372343 ITGAEP38570 1179 aa16.98■□□□□ 0.31
IPO13-202ENST00000372343 CEP164Q9UPV0 1460 aa16.98■□□□□ 0.31
IPO13-202ENST00000372343 EIF4G1Q04637 1599 aaKnown RBP16.9■□□□□ 0.3
IPO13-202ENST00000372343 UNC13AQ9UPW8 1703 aa16.89■□□□□ 0.3
IPO13-202ENST00000372343 VPS8Q8N3P4 1428 aa16.87■□□□□ 0.29
IPO13-202ENST00000372343 ATP1B4Q9UN42 357 aaPredicted RBP16.82■□□□□ 0.28
IPO13-202ENST00000372343 BAZ1BQ9UIG0 1483 aaKnown RBP16.78■□□□□ 0.28
IPO13-202ENST00000372343 RAPGEF2Q9Y4G8 1499 aa16.77■□□□□ 0.27
IPO13-202ENST00000372343 CLSPNQ9HAW4 1339 aa16.72■□□□□ 0.27
IPO13-202ENST00000372343 KANK4Q5T7N3 995 aaPredicted RBP16.7■□□□□ 0.26
IPO13-202ENST00000372343 BICRAQ9NZM4 1560 aa16.68■□□□□ 0.26
IPO13-202ENST00000372343 SYNJ1O43426 1573 aa16.68■□□□□ 0.26
IPO13-202ENST00000372343 FAM50AQ14320 339 aaKnown RBP16.67■□□□□ 0.26
IPO13-202ENST00000372343 KIF21BO75037 1637 aa16.66■□□□□ 0.26
IPO13-202ENST00000372343 ATAD2BQ9ULI0 1458 aa16.65■□□□□ 0.26
IPO13-202ENST00000372343 DHX57Q6P158 1386 aaKnown RBP16.63■□□□□ 0.25
IPO13-202ENST00000372343 NEFLP07196 543 aa16.63■□□□□ 0.25
IPO13-202ENST00000372343 BCANQ96GW7 911 aa16.61■□□□□ 0.25
IPO13-202ENST00000372343 SUPT16HQ9Y5B9 1047 aaKnown RBP16.6■□□□□ 0.25
IPO13-202ENST00000372343 KIF27Q86VH2 1401 aa16.58■□□□□ 0.24
IPO13-202ENST00000372343 CCNB3Q8WWL7 1395 aa16.57■□□□□ 0.24
IPO13-202ENST00000372343 P3H3Q8IVL6 736 aa16.56■□□□□ 0.24
IPO13-202ENST00000372343 DDX10Q13206 875 aaKnown RBP16.56■□□□□ 0.24
IPO13-202ENST00000372343 FKBP8Q14318 412 aa16.48■□□□□ 0.23
IPO13-202ENST00000372343 ANP32CO43423 234 aa16.46■□□□□ 0.23
IPO13-202ENST00000372343 SIN3AQ96ST3 1273 aa16.45■□□□□ 0.22
IPO13-202ENST00000372343 HIRIP3Q9BW71 556 aaPredicted RBP16.45■□□□□ 0.22
IPO13-202ENST00000372343 PEG3Q9GZU2 1588 aa16.45■□□□□ 0.22
IPO13-202ENST00000372343 RAB3GAP2Q9H2M9 1393 aa16.44■□□□□ 0.22
IPO13-202ENST00000372343 ARAP1Q96P48 1450 aa16.44■□□□□ 0.22
IPO13-202ENST00000372343 PRXQ9BXM0 1461 aa16.43■□□□□ 0.22
IPO13-202ENST00000372343 KCNH8Q96L42 1107 aa16.43■□□□□ 0.22
IPO13-202ENST00000372343 TOP2BQ02880 1626 aa16.41■□□□□ 0.22
IPO13-202ENST00000372343 TRIM52Q96A61 297 aa16.4■□□□□ 0.22
IPO13-202ENST00000372343 ERICH3Q5RHP9 1530 aa16.4■□□□□ 0.22
IPO13-202ENST00000372343 RRBP1Q9P2E9 1410 aaKnown RBP16.39■□□□□ 0.21
IPO13-202ENST00000372343 SETD5Q9C0A6 1442 aa16.37■□□□□ 0.21
IPO13-202ENST00000372343 CUX2O14529 1486 aa16.37■□□□□ 0.21
IPO13-202ENST00000372343 TSHZ2Q9NRE2 1034 aa16.36■□□□□ 0.21
IPO13-202ENST00000372343 CARMIL1Q5VZK9 1371 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms