RNA–Protein interactions for RNA: ENST00000590869.1

ILF3-220, Transcript of interleukin enhancer binding factor 3, humanhuman

TSL 5

Gene ILF3, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ILF3-220ENST00000590869 NISCHQ9Y2I1 1504 aa32.36■■■□□ 2.77
ILF3-220ENST00000590869 ABCC9O60706 1549 aa29.8■■■□□ 2.36
ILF3-220ENST00000590869 CCDC180Q9P1Z9 1646 aa29.2■■■□□ 2.27
ILF3-220ENST00000590869 DNAJC5BQ9UF47 199 aa28.48■■■□□ 2.15
ILF3-220ENST00000590869 RB1CC1Q8TDY2 1594 aa28.11■■■□□ 2.09
ILF3-220ENST00000590869 NACADO15069 1562 aa27.8■■■□□ 2.04
ILF3-220ENST00000590869 PABPN1Q86U42 306 aaKnown RBP eCLIP27.68■■■□□ 2.022e-7■■□□□ 13.6
ILF3-220ENST00000590869 DCAF8L2P0C7V8 631 aa27.57■■■□□ 2
ILF3-220ENST00000590869 UNC13AQ9UPW8 1703 aa27.32■■□□□ 1.96
ILF3-220ENST00000590869 BICRAQ9NZM4 1560 aa27.3■■□□□ 1.96
ILF3-220ENST00000590869 MYO15BQ96JP2 1530 aa27.28■■□□□ 1.96
ILF3-220ENST00000590869 SHROOM4Q9ULL8 1493 aa26.93■■□□□ 1.9
ILF3-220ENST00000590869 CECR2Q9BXF3 1484 aa26.92■■□□□ 1.9
ILF3-220ENST00000590869 CC2D2AQ9P2K1 1620 aa26.85■■□□□ 1.89
ILF3-220ENST00000590869 DCAF1Q9Y4B6 1507 aa26.71■■□□□ 1.87
ILF3-220ENST00000590869 ZCCHC6Q5VYS8 1495 aaKnown RBP26.69■■□□□ 1.86
ILF3-220ENST00000590869 EIF4G1Q04637 1599 aaKnown RBP26.68■■□□□ 1.86
ILF3-220ENST00000590869 SCRIBQ14160 1630 aa26.57■■□□□ 1.84
ILF3-220ENST00000590869 DNAJC5Q9H3Z4 198 aa26.57■■□□□ 1.84
ILF3-220ENST00000590869 CUX2O14529 1486 aa25.93■■□□□ 1.74
ILF3-220ENST00000590869 ERCC6Q03468 1493 aa25.77■■□□□ 1.72
ILF3-220ENST00000590869 NCAPD3P42695 1498 aa25.72■■□□□ 1.71
ILF3-220ENST00000590869 ATAD2BQ9ULI0 1458 aa25.54■■□□□ 1.68
ILF3-220ENST00000590869 HMGXB3Q12766 1538 aa25.43■■□□□ 1.66
ILF3-220ENST00000590869 NESP48681 1621 aa25.42■■□□□ 1.66
ILF3-220ENST00000590869 SMARCA2P51531 1590 aa25.41■■□□□ 1.66
ILF3-220ENST00000590869 SMARCA4P51532 1647 aa25.31■■□□□ 1.64
ILF3-220ENST00000590869 BAZ1BQ9UIG0 1483 aaKnown RBP25.25■■□□□ 1.63
ILF3-220ENST00000590869 THOC2Q8NI27 1593 aaKnown RBP25.25■■□□□ 1.63
ILF3-220ENST00000590869 LAMC3Q9Y6N6 1575 aa25.17■■□□□ 1.62
ILF3-220ENST00000590869 BAZ1AQ9NRL2 1556 aaPredicted RBP25.14■■□□□ 1.62
ILF3-220ENST00000590869 TRIM41Q8WV44 630 aa25.14■■□□□ 1.62
ILF3-220ENST00000590869 PEG3Q9GZU2 1588 aa25.1■■□□□ 1.61
ILF3-220ENST00000590869 PDS5BQ9NTI5 1447 aa25.1■■□□□ 1.61
ILF3-220ENST00000590869 KIF21AQ7Z4S6 1674 aa24.98■■□□□ 1.59
ILF3-220ENST00000590869 CADPSQ9ULU8 1353 aa24.92■■□□□ 1.58
ILF3-220ENST00000590869 MROH2BQ7Z745 1585 aa24.91■■□□□ 1.58
ILF3-220ENST00000590869 MRC2Q9UBG0 1479 aa24.88■■□□□ 1.57
ILF3-220ENST00000590869 WDR62O43379 1518 aa24.82■■□□□ 1.56
ILF3-220ENST00000590869 OSCARQ8IYS5 282 aa24.69■■□□□ 1.54
ILF3-220ENST00000590869 CEP164Q9UPV0 1460 aa24.66■■□□□ 1.54
ILF3-220ENST00000590869 FANCD2Q9BXW9 1451 aa24.6■■□□□ 1.53
ILF3-220ENST00000590869 WIZO95785 1651 aa24.53■■□□□ 1.52
ILF3-220ENST00000590869 CFTRP13569 1480 aa24.5■■□□□ 1.51
ILF3-220ENST00000590869 URB2Q14146 1524 aaKnown RBP24.41■■□□□ 1.5
ILF3-220ENST00000590869 RIMBP3CA6NJZ7 1639 aa24.32■■□□□ 1.48
ILF3-220ENST00000590869 RIMBP3BA6NNM3 1639 aa24.32■■□□□ 1.48
ILF3-220ENST00000590869 RIMBP3Q9UFD9 1639 aa24.32■■□□□ 1.48
ILF3-220ENST00000590869 ARHGEF11O15085 1522 aa24.24■■□□□ 1.47
ILF3-220ENST00000590869 TOP2AP11388 1531 aaKnown RBP24.24■■□□□ 1.47
ILF3-220ENST00000590869 RSF1Q96T23 1441 aaPredicted RBP24.23■■□□□ 1.47
ILF3-220ENST00000590869 IFT140Q96RY7 1462 aa24.21■■□□□ 1.47
ILF3-220ENST00000590869 ZNF608Q9ULD9 1512 aaPredicted RBP24.2■■□□□ 1.47
ILF3-220ENST00000590869 CYB5RLQ6IPT4 315 aa24.13■■□□□ 1.45
ILF3-220ENST00000590869 TOPBP1Q92547 1522 aa24.06■■□□□ 1.44
ILF3-220ENST00000590869 TRHP20396 242 aaPredicted RBP24.03■■□□□ 1.44
ILF3-220ENST00000590869 PRDM2Q13029 1718 aa24.02■■□□□ 1.44
ILF3-220ENST00000590869 ABCC8Q09428 1581 aa24■■□□□ 1.43
ILF3-220ENST00000590869 CCDC88BA6NC98 1476 aa24■■□□□ 1.43
ILF3-220ENST00000590869 EIF4G3O43432 1585 aaKnown RBP23.99■■□□□ 1.43
ILF3-220ENST00000590869 ARAP1Q96P48 1450 aa23.97■■□□□ 1.43
ILF3-220ENST00000590869 AQRO60306 1485 aaKnown RBP eCLIP23.94■■□□□ 1.423e-14■■■■□ 20
ILF3-220ENST00000590869 DNMBPQ6XZF7 1577 aa23.91■■□□□ 1.42
ILF3-220ENST00000590869 FBLN2P98095 1184 aa23.89■■□□□ 1.41
ILF3-220ENST00000590869 CHD1O14646 1710 aa23.86■■□□□ 1.41
ILF3-220ENST00000590869 TARBP1Q13395 1621 aaKnown RBP23.85■■□□□ 1.41
ILF3-220ENST00000590869 POLA1P09884 1462 aaPredicted RBP23.78■■□□□ 1.4
ILF3-220ENST00000590869 AEBP2Q6ZN18 517 aaPredicted RBP23.74■■□□□ 1.39
ILF3-220ENST00000590869 TDRD9Q8NDG6 1382 aaKnown RBP23.71■■□□□ 1.39
ILF3-220ENST00000590869 RAD54L2Q9Y4B4 1467 aa23.7■■□□□ 1.38
ILF3-220ENST00000590869 SOGA1O94964 1423 aa23.69■■□□□ 1.38
ILF3-220ENST00000590869 CLASP1Q7Z460 1538 aa23.67■■□□□ 1.38
ILF3-220ENST00000590869 SNAPC4Q5SXM2 1469 aa23.66■■□□□ 1.38
ILF3-220ENST00000590869 CHMP7Q8WUX9 453 aaPredicted RBP23.65■■□□□ 1.38
ILF3-220ENST00000590869 SYNJ1O43426 1573 aa23.6■■□□□ 1.37
ILF3-220ENST00000590869 WDR97A6NE52 1622 aa23.59■■□□□ 1.37
ILF3-220ENST00000590869 MAGI1Q96QZ7 1491 aaPredicted RBP23.59■■□□□ 1.37
ILF3-220ENST00000590869 FGD5Q6ZNL6 1462 aa23.56■■□□□ 1.36
ILF3-220ENST00000590869 GRIN2BQ13224 1484 aa23.54■■□□□ 1.36
ILF3-220ENST00000590869 SYNJ2O15056 1496 aa23.52■■□□□ 1.36
ILF3-220ENST00000590869 GAPVD1Q14C86 1478 aa23.49■■□□□ 1.35
ILF3-220ENST00000590869 CUX1P39880 1505 aa23.43■■□□□ 1.34
ILF3-220ENST00000590869 PBRM1Q86U86 1689 aa23.28■■□□□ 1.32
ILF3-220ENST00000590869 ABCA10Q8WWZ4 1543 aa23.27■■□□□ 1.32
ILF3-220ENST00000590869 ERCC6L2Q5T890 1561 aa23.24■■□□□ 1.31
ILF3-220ENST00000590869 ABCA5Q8WWZ7 1642 aa23.23■■□□□ 1.31
ILF3-220ENST00000590869 GRIN2AQ12879 1464 aa23.23■■□□□ 1.31
ILF3-220ENST00000590869 NUP160Q12769 1436 aa23.19■■□□□ 1.3
ILF3-220ENST00000590869 CEP170Q5SW79 1584 aa23.18■■□□□ 1.3
ILF3-220ENST00000590869 ADAMTS12P58397 1594 aa23.1■■□□□ 1.29
ILF3-220ENST00000590869 WRNQ14191 1432 aaPredicted RBP eCLIP23.09■■□□□ 1.29
ILF3-220ENST00000590869 SHROOM2Q13796 1616 aa23.08■■□□□ 1.29
ILF3-220ENST00000590869 FHAD1B1AJZ9 1412 aa23.08■■□□□ 1.28
ILF3-220ENST00000590869 PRG4Q92954 1404 aaPredicted RBP23■■□□□ 1.27
ILF3-220ENST00000590869 KIF13AQ9H1H9 1805 aa23■■□□□ 1.27
ILF3-220ENST00000590869 FAM69CQ0P6D2 419 aa22.98■■□□□ 1.27
ILF3-220ENST00000590869 JPH4Q96JJ6 628 aa22.97■■□□□ 1.27
ILF3-220ENST00000590869 ERICH3Q5RHP9 1530 aa22.96■■□□□ 1.27
ILF3-220ENST00000590869 ABCC10Q5T3U5 1492 aa22.95■■□□□ 1.26
ILF3-220ENST00000590869 NPM1P06748 294 aaKnown RBP eCLIP22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms