Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CTSDP07339 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTSDP07339 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTSDP07339 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.37□□□□□ -0.11
CTSDP07339 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
CTSDP07339 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CTSDP07339 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTSDP07339 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CTSDP07339 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTSDP07339 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTSDP07339 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTSDP07339 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CTSDP07339 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTSDP07339 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.37□□□□□ -0.11
CTSDP07339 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CTSDP07339 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTSDP07339 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTSDP07339 INGX-201ENST00000359239 846 ntBASIC14.37□□□□□ -0.11
CTSDP07339 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTSDP07339 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
CTSDP07339 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CTSDP07339 KRT18P48-201ENST00000434763 852 ntBASIC14.37□□□□□ -0.11
CTSDP07339 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC14.37□□□□□ -0.11
CTSDP07339 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
CTSDP07339 AC034232.1-201ENST00000506026 1064 ntBASIC14.37□□□□□ -0.11
CTSDP07339 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CTSDP07339 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
CTSDP07339 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTSDP07339 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC14.37□□□□□ -0.11
CTSDP07339 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTSDP07339 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTSDP07339 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC14.37□□□□□ -0.11
CTSDP07339 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTSDP07339 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTSDP07339 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTSDP07339 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTSDP07339 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CTSDP07339 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CTSDP07339 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTSDP07339 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTSDP07339 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CTSDP07339 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CTSDP07339 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC14.36□□□□□ -0.11
CTSDP07339 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CTSDP07339 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CTSDP07339 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CTSDP07339 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CTSDP07339 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CTSDP07339 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
CTSDP07339 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CTSDP07339 EGFEM1P-202ENST00000431685 1563 ntBASIC14.36□□□□□ -0.11
CTSDP07339 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC14.36□□□□□ -0.11
CTSDP07339 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CTSDP07339 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CTSDP07339 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CTSDP07339 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CTSDP07339 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CTSDP07339 COX5BP2-201ENST00000392354 334 ntBASIC14.36□□□□□ -0.11
CTSDP07339 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
CTSDP07339 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC14.36□□□□□ -0.11
CTSDP07339 AL596275.1-201ENST00000423464 877 ntBASIC14.36□□□□□ -0.11
CTSDP07339 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC14.36□□□□□ -0.11
CTSDP07339 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC14.36□□□□□ -0.11
CTSDP07339 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC14.36□□□□□ -0.11
CTSDP07339 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC14.36□□□□□ -0.11
CTSDP07339 IGHV3-52-201ENST00000519770 353 ntBASIC14.36□□□□□ -0.11
CTSDP07339 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC14.36□□□□□ -0.11
CTSDP07339 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CTSDP07339 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC14.36□□□□□ -0.11
CTSDP07339 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CTSDP07339 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC14.36□□□□□ -0.11
CTSDP07339 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CTSDP07339 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CTSDP07339 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CTSDP07339 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.36□□□□□ -0.11
CTSDP07339 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
CTSDP07339 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.36□□□□□ -0.11
CTSDP07339 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC14.36□□□□□ -0.11
CTSDP07339 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CTSDP07339 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CTSDP07339 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CTSDP07339 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CTSDP07339 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CTSDP07339 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.36□□□□□ -0.11
CTSDP07339 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CTSDP07339 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CTSDP07339 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.36□□□□□ -0.11
CTSDP07339 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTSDP07339 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTSDP07339 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTSDP07339 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTSDP07339 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTSDP07339 STX3-203ENST00000529177 1571 ntTSL 2 BASIC14.35□□□□□ -0.11
CTSDP07339 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CTSDP07339 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CTSDP07339 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTSDP07339 AC007950.2-201ENST00000615045 2347 ntBASIC14.35□□□□□ -0.11
CTSDP07339 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.35□□□□□ -0.11
CTSDP07339 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.35□□□□□ -0.11
CTSDP07339 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms