Protein–RNA interactions for Protein: P02730

SLC4A1, Band 3 anion transport protein, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A1P02730 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC4A1P02730 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLC4A1P02730 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC4A1P02730 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.55■□□□□ 0.4
SLC4A1P02730 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.55■□□□□ 0.4
SLC4A1P02730 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.55■□□□□ 0.4
SLC4A1P02730 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.55■□□□□ 0.4
SLC4A1P02730 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.55■□□□□ 0.4
SLC4A1P02730 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLC4A1P02730 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.55■□□□□ 0.4
SLC4A1P02730 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.55■□□□□ 0.4
SLC4A1P02730 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.55■□□□□ 0.4
SLC4A1P02730 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.55■□□□□ 0.4
SLC4A1P02730 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.55■□□□□ 0.4
SLC4A1P02730 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC4A1P02730 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLC4A1P02730 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLC4A1P02730 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
SLC4A1P02730 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC4A1P02730 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
SLC4A1P02730 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
SLC4A1P02730 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC4A1P02730 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
SLC4A1P02730 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SLC4A1P02730 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC4A1P02730 AC080080.1-201ENST00000625121 2420 ntBASIC17.55■□□□□ 0.4
SLC4A1P02730 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SLC4A1P02730 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SLC4A1P02730 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SLC4A1P02730 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC4A1P02730 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.54■□□□□ 0.4
SLC4A1P02730 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC4A1P02730 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.54■□□□□ 0.4
SLC4A1P02730 AC132938.5-201ENST00000624980 1813 ntBASIC17.54■□□□□ 0.4
SLC4A1P02730 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
SLC4A1P02730 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.54■□□□□ 0.4
SLC4A1P02730 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC4A1P02730 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.54■□□□□ 0.4
SLC4A1P02730 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC4A1P02730 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC4A1P02730 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC4A1P02730 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC4A1P02730 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC4A1P02730 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC4A1P02730 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.54■□□□□ 0.4
SLC4A1P02730 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.54■□□□□ 0.4
SLC4A1P02730 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SLC4A1P02730 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.54■□□□□ 0.4
SLC4A1P02730 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.54■□□□□ 0.4
SLC4A1P02730 AL139327.4-201ENST00000612362 153 ntBASIC17.54■□□□□ 0.4
SLC4A1P02730 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.54■□□□□ 0.4
SLC4A1P02730 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.54■□□□□ 0.4
SLC4A1P02730 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC4A1P02730 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
SLC4A1P02730 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC4A1P02730 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SLC4A1P02730 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SLC4A1P02730 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.54■□□□□ 0.4
SLC4A1P02730 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC4A1P02730 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.54■□□□□ 0.4
SLC4A1P02730 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC4A1P02730 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
SLC4A1P02730 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC4A1P02730 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
SLC4A1P02730 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.53■□□□□ 0.4
SLC4A1P02730 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC4A1P02730 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SLC4A1P02730 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.53■□□□□ 0.4
SLC4A1P02730 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC4A1P02730 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.53■□□□□ 0.4
SLC4A1P02730 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC4A1P02730 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
SLC4A1P02730 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC4A1P02730 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC4A1P02730 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC4A1P02730 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.53■□□□□ 0.4
SLC4A1P02730 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC4A1P02730 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC4A1P02730 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC4A1P02730 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC4A1P02730 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.53■□□□□ 0.4
SLC4A1P02730 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
SLC4A1P02730 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.53■□□□□ 0.4
SLC4A1P02730 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SLC4A1P02730 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SLC4A1P02730 STK19B-204ENST00000512515 211 ntBASIC17.53■□□□□ 0.4
SLC4A1P02730 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.53■□□□□ 0.4
SLC4A1P02730 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.53■□□□□ 0.4
SLC4A1P02730 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
SLC4A1P02730 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.53■□□□□ 0.4
SLC4A1P02730 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SLC4A1P02730 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.53■□□□□ 0.4
SLC4A1P02730 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.53■□□□□ 0.4
SLC4A1P02730 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
SLC4A1P02730 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.53■□□□□ 0.4
SLC4A1P02730 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.53■□□□□ 0.4
SLC4A1P02730 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SLC4A1P02730 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SLC4A1P02730 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.53■□□□□ 0.4
SLC4A1P02730 AC046185.3-201ENST00000623228 1824 ntBASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms