Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDRT1O95170 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDRT1O95170 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.46■□□□□ 0.07
CDRT1O95170 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CDRT1O95170 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC15.46■□□□□ 0.07
CDRT1O95170 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
CDRT1O95170 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDRT1O95170 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.46■□□□□ 0.07
CDRT1O95170 MIR1238-201ENST00000408483 83 ntBASIC15.46■□□□□ 0.07
CDRT1O95170 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC15.46■□□□□ 0.07
CDRT1O95170 PHB2-202ENST00000440277 996 ntTSL 5 BASIC15.46■□□□□ 0.07
CDRT1O95170 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC15.46■□□□□ 0.07
CDRT1O95170 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC15.46■□□□□ 0.07
CDRT1O95170 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CDRT1O95170 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.07
CDRT1O95170 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC15.46■□□□□ 0.07
CDRT1O95170 FITM1-202ENST00000559294 800 ntBASIC15.46■□□□□ 0.07
CDRT1O95170 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC15.46■□□□□ 0.07
CDRT1O95170 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC15.46■□□□□ 0.07
CDRT1O95170 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
CDRT1O95170 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
CDRT1O95170 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CDRT1O95170 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDRT1O95170 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDRT1O95170 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDRT1O95170 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
CDRT1O95170 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CDRT1O95170 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
CDRT1O95170 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDRT1O95170 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDRT1O95170 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
CDRT1O95170 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.46■□□□□ 0.06
CDRT1O95170 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
CDRT1O95170 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CDRT1O95170 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.06
CDRT1O95170 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.46■□□□□ 0.06
CDRT1O95170 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDRT1O95170 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDRT1O95170 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CDRT1O95170 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDRT1O95170 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
CDRT1O95170 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
CDRT1O95170 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDRT1O95170 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDRT1O95170 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
CDRT1O95170 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDRT1O95170 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.45■□□□□ 0.06
CDRT1O95170 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CDRT1O95170 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CDRT1O95170 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDRT1O95170 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
CDRT1O95170 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDRT1O95170 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CDRT1O95170 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
CDRT1O95170 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDRT1O95170 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CDRT1O95170 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC15.45■□□□□ 0.06
CDRT1O95170 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC15.45■□□□□ 0.06
CDRT1O95170 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
CDRT1O95170 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CDRT1O95170 GRAMD4P1-201ENST00000435181 1110 ntBASIC15.45■□□□□ 0.06
CDRT1O95170 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC15.45■□□□□ 0.06
CDRT1O95170 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC15.45■□□□□ 0.06
CDRT1O95170 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC15.45■□□□□ 0.06
CDRT1O95170 MIR4785-201ENST00000585005 73 ntBASIC15.45■□□□□ 0.06
CDRT1O95170 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDRT1O95170 AC010240.3-201ENST00000607688 395 ntBASIC15.45■□□□□ 0.06
CDRT1O95170 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC15.45■□□□□ 0.06
CDRT1O95170 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDRT1O95170 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDRT1O95170 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDRT1O95170 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDRT1O95170 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC15.45■□□□□ 0.06
CDRT1O95170 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CDRT1O95170 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
CDRT1O95170 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDRT1O95170 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDRT1O95170 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CDRT1O95170 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDRT1O95170 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
CDRT1O95170 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDRT1O95170 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDRT1O95170 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.44■□□□□ 0.06
CDRT1O95170 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CDRT1O95170 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC15.44■□□□□ 0.06
CDRT1O95170 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC15.44■□□□□ 0.06
CDRT1O95170 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CDRT1O95170 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDRT1O95170 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDRT1O95170 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDRT1O95170 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDRT1O95170 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDRT1O95170 BAALC-201ENST00000297574 801 ntTSL 3 BASIC15.44■□□□□ 0.06
CDRT1O95170 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDRT1O95170 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CDRT1O95170 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDRT1O95170 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CDRT1O95170 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC15.44■□□□□ 0.06
CDRT1O95170 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC15.44■□□□□ 0.06
CDRT1O95170 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms