Protein–RNA interactions for Protein: Q9UQL6

HDAC5, Histone deacetylase 5, humanhuman

Predictions only

Length 1,122 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5Q9UQL6 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
HDAC5Q9UQL6 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
HDAC5Q9UQL6 AP002414.3-201ENST00000589352 1468 ntBASIC21.56■■□□□ 1.04
HDAC5Q9UQL6 EGFEM1P-202ENST00000431685 1563 ntBASIC21.56■■□□□ 1.04
HDAC5Q9UQL6 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HDAC5Q9UQL6 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HDAC5Q9UQL6 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HDAC5Q9UQL6 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
HDAC5Q9UQL6 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
HDAC5Q9UQL6 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
HDAC5Q9UQL6 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
HDAC5Q9UQL6 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
HDAC5Q9UQL6 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC21.55■■□□□ 1.04
HDAC5Q9UQL6 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HDAC5Q9UQL6 PTCHD3P3-201ENST00000403073 906 ntBASIC21.55■■□□□ 1.04
HDAC5Q9UQL6 AC098831.1-202ENST00000438821 336 ntBASIC21.55■■□□□ 1.04
HDAC5Q9UQL6 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC21.55■■□□□ 1.04
HDAC5Q9UQL6 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC21.55■■□□□ 1.04
HDAC5Q9UQL6 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
HDAC5Q9UQL6 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC21.55■■□□□ 1.04
HDAC5Q9UQL6 AC243591.1-201ENST00000452967 1364 ntBASIC21.55■■□□□ 1.04
HDAC5Q9UQL6 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC21.55■■□□□ 1.04
HDAC5Q9UQL6 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC21.55■■□□□ 1.04
HDAC5Q9UQL6 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
HDAC5Q9UQL6 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
HDAC5Q9UQL6 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HDAC5Q9UQL6 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HDAC5Q9UQL6 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC21.55■■□□□ 1.04
HDAC5Q9UQL6 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
HDAC5Q9UQL6 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
HDAC5Q9UQL6 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
HDAC5Q9UQL6 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC21.55■■□□□ 1.04
HDAC5Q9UQL6 AL023806.1-201ENST00000603994 1649 ntBASIC21.55■■□□□ 1.04
HDAC5Q9UQL6 IL9RP2-201ENST00000423948 1312 ntBASIC21.55■■□□□ 1.04
HDAC5Q9UQL6 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC21.55■■□□□ 1.04
HDAC5Q9UQL6 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC21.54■■□□□ 1.04
HDAC5Q9UQL6 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HDAC5Q9UQL6 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
HDAC5Q9UQL6 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
HDAC5Q9UQL6 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC21.54■■□□□ 1.04
HDAC5Q9UQL6 IGHV3-65-201ENST00000523210 341 ntBASIC21.54■■□□□ 1.04
HDAC5Q9UQL6 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC21.54■■□□□ 1.04
HDAC5Q9UQL6 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HDAC5Q9UQL6 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
HDAC5Q9UQL6 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
HDAC5Q9UQL6 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
HDAC5Q9UQL6 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
HDAC5Q9UQL6 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HDAC5Q9UQL6 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
HDAC5Q9UQL6 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
HDAC5Q9UQL6 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
HDAC5Q9UQL6 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
HDAC5Q9UQL6 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
HDAC5Q9UQL6 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HDAC5Q9UQL6 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC21.53■■□□□ 1.04
HDAC5Q9UQL6 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC21.53■■□□□ 1.04
HDAC5Q9UQL6 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HDAC5Q9UQL6 TEX30-205ENST00000376029 959 ntTSL 2 BASIC21.53■■□□□ 1.04
HDAC5Q9UQL6 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC21.53■■□□□ 1.04
HDAC5Q9UQL6 CENPM-204ENST00000402420 688 ntTSL 5 BASIC21.53■■□□□ 1.04
HDAC5Q9UQL6 ATP6V0CP3-201ENST00000417255 467 ntBASIC21.53■■□□□ 1.04
HDAC5Q9UQL6 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC21.53■■□□□ 1.04
HDAC5Q9UQL6 AC145285.3-201ENST00000564603 959 ntBASIC21.53■■□□□ 1.04
HDAC5Q9UQL6 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HDAC5Q9UQL6 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
HDAC5Q9UQL6 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
HDAC5Q9UQL6 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
HDAC5Q9UQL6 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
HDAC5Q9UQL6 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HDAC5Q9UQL6 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC21.53■■□□□ 1.04
HDAC5Q9UQL6 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
HDAC5Q9UQL6 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC21.53■■□□□ 1.04
HDAC5Q9UQL6 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HDAC5Q9UQL6 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC21.53■■□□□ 1.04
HDAC5Q9UQL6 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC21.53■■□□□ 1.04
HDAC5Q9UQL6 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC21.53■■□□□ 1.04
HDAC5Q9UQL6 CROCCP2-202ENST00000412962 2773 ntBASIC21.53■■□□□ 1.04
HDAC5Q9UQL6 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HDAC5Q9UQL6 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC21.53■■□□□ 1.04
HDAC5Q9UQL6 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC21.52■■□□□ 1.04
HDAC5Q9UQL6 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
HDAC5Q9UQL6 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HDAC5Q9UQL6 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC21.52■■□□□ 1.04
HDAC5Q9UQL6 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
HDAC5Q9UQL6 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
HDAC5Q9UQL6 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HDAC5Q9UQL6 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
HDAC5Q9UQL6 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
HDAC5Q9UQL6 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC21.52■■□□□ 1.04
HDAC5Q9UQL6 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HDAC5Q9UQL6 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HDAC5Q9UQL6 CSF3-203ENST00000394148 622 ntTSL 3 BASIC21.52■■□□□ 1.04
HDAC5Q9UQL6 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC21.52■■□□□ 1.04
HDAC5Q9UQL6 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HDAC5Q9UQL6 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC21.52■■□□□ 1.04
HDAC5Q9UQL6 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
HDAC5Q9UQL6 AC117500.6-201ENST00000624871 588 ntBASIC21.52■■□□□ 1.04
HDAC5Q9UQL6 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC21.52■■□□□ 1.04
HDAC5Q9UQL6 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
HDAC5Q9UQL6 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms