Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.22■□□□□ 0.35
TREX1Q9NSU2 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TREX1Q9NSU2 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TREX1Q9NSU2 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.22■□□□□ 0.35
TREX1Q9NSU2 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
TREX1Q9NSU2 HCG11-201ENST00000411553 5696 ntBASIC17.22■□□□□ 0.35
TREX1Q9NSU2 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.22■□□□□ 0.35
TREX1Q9NSU2 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
TREX1Q9NSU2 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TREX1Q9NSU2 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TREX1Q9NSU2 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TREX1Q9NSU2 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TREX1Q9NSU2 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.22■□□□□ 0.35
TREX1Q9NSU2 LINC00982-205ENST00000420957 435 ntBASIC17.22■□□□□ 0.35
TREX1Q9NSU2 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.22■□□□□ 0.35
TREX1Q9NSU2 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
TREX1Q9NSU2 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.22■□□□□ 0.35
TREX1Q9NSU2 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.22■□□□□ 0.35
TREX1Q9NSU2 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.22■□□□□ 0.35
TREX1Q9NSU2 AL732292.2-201ENST00000609649 430 ntBASIC17.22■□□□□ 0.35
TREX1Q9NSU2 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TREX1Q9NSU2 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.22■□□□□ 0.35
TREX1Q9NSU2 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.22■□□□□ 0.35
TREX1Q9NSU2 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TREX1Q9NSU2 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
TREX1Q9NSU2 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TREX1Q9NSU2 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TREX1Q9NSU2 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.22■□□□□ 0.35
TREX1Q9NSU2 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TREX1Q9NSU2 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TREX1Q9NSU2 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TREX1Q9NSU2 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TREX1Q9NSU2 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TREX1Q9NSU2 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TREX1Q9NSU2 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TREX1Q9NSU2 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.21■□□□□ 0.35
TREX1Q9NSU2 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TREX1Q9NSU2 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TREX1Q9NSU2 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.21■□□□□ 0.35
TREX1Q9NSU2 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TREX1Q9NSU2 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
TREX1Q9NSU2 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TREX1Q9NSU2 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.21■□□□□ 0.35
TREX1Q9NSU2 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TREX1Q9NSU2 FLJ38576-201ENST00000623820 2459 ntBASIC17.21■□□□□ 0.35
TREX1Q9NSU2 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.21■□□□□ 0.35
TREX1Q9NSU2 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.21■□□□□ 0.35
TREX1Q9NSU2 RBM17P3-201ENST00000417687 1192 ntBASIC17.21■□□□□ 0.35
TREX1Q9NSU2 TSPY19P-201ENST00000418461 509 ntBASIC17.21■□□□□ 0.35
TREX1Q9NSU2 TSPY18P-201ENST00000441642 509 ntBASIC17.21■□□□□ 0.35
TREX1Q9NSU2 KRT18P31-201ENST00000506277 1292 ntBASIC17.21■□□□□ 0.35
TREX1Q9NSU2 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.21■□□□□ 0.35
TREX1Q9NSU2 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.21■□□□□ 0.35
TREX1Q9NSU2 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.21■□□□□ 0.35
TREX1Q9NSU2 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.21■□□□□ 0.35
TREX1Q9NSU2 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.21■□□□□ 0.35
TREX1Q9NSU2 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.21■□□□□ 0.35
TREX1Q9NSU2 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.21■□□□□ 0.35
TREX1Q9NSU2 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TREX1Q9NSU2 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.21■□□□□ 0.35
TREX1Q9NSU2 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
TREX1Q9NSU2 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.21■□□□□ 0.35
TREX1Q9NSU2 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TREX1Q9NSU2 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.21■□□□□ 0.35
TREX1Q9NSU2 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TREX1Q9NSU2 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TREX1Q9NSU2 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
TREX1Q9NSU2 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TREX1Q9NSU2 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
TREX1Q9NSU2 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.2■□□□□ 0.34
TREX1Q9NSU2 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TREX1Q9NSU2 AC078925.2-201ENST00000624013 1973 ntBASIC17.2■□□□□ 0.34
TREX1Q9NSU2 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TREX1Q9NSU2 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TREX1Q9NSU2 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TREX1Q9NSU2 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TREX1Q9NSU2 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
TREX1Q9NSU2 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
TREX1Q9NSU2 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TREX1Q9NSU2 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
TREX1Q9NSU2 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TREX1Q9NSU2 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
TREX1Q9NSU2 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TREX1Q9NSU2 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TREX1Q9NSU2 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TREX1Q9NSU2 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TREX1Q9NSU2 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.2■□□□□ 0.34
TREX1Q9NSU2 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TREX1Q9NSU2 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TREX1Q9NSU2 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TREX1Q9NSU2 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
TREX1Q9NSU2 BX005266.1-201ENST00000473402 457 ntBASIC17.2■□□□□ 0.34
TREX1Q9NSU2 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.2■□□□□ 0.34
TREX1Q9NSU2 DUX4L17-201ENST00000557360 1267 ntBASIC17.2■□□□□ 0.34
TREX1Q9NSU2 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.2■□□□□ 0.34
TREX1Q9NSU2 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TREX1Q9NSU2 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.2■□□□□ 0.34
TREX1Q9NSU2 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.2■□□□□ 0.34
TREX1Q9NSU2 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.2■□□□□ 0.34
TREX1Q9NSU2 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms