Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC18.88■□□□□ 0.61
TRMT13Q9NUP7 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC18.88■□□□□ 0.61
TRMT13Q9NUP7 RN7SL589P-201ENST00000481268 310 ntBASIC18.88■□□□□ 0.61
TRMT13Q9NUP7 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18.88■□□□□ 0.61
TRMT13Q9NUP7 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC18.88■□□□□ 0.61
TRMT13Q9NUP7 AC051619.7-201ENST00000568314 623 ntBASIC18.88■□□□□ 0.61
TRMT13Q9NUP7 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
TRMT13Q9NUP7 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
TRMT13Q9NUP7 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRMT13Q9NUP7 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRMT13Q9NUP7 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRMT13Q9NUP7 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC18.88■□□□□ 0.61
TRMT13Q9NUP7 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRMT13Q9NUP7 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRMT13Q9NUP7 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRMT13Q9NUP7 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.88■□□□□ 0.61
TRMT13Q9NUP7 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.88■□□□□ 0.61
TRMT13Q9NUP7 AC104581.1-202ENST00000635932 2618 ntBASIC18.87■□□□□ 0.61
TRMT13Q9NUP7 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRMT13Q9NUP7 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
TRMT13Q9NUP7 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRMT13Q9NUP7 KLK8-202ENST00000320838 456 ntTSL 5 BASIC18.87■□□□□ 0.61
TRMT13Q9NUP7 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRMT13Q9NUP7 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRMT13Q9NUP7 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRMT13Q9NUP7 PMS2P4-201ENST00000412466 1052 ntBASIC18.87■□□□□ 0.61
TRMT13Q9NUP7 GPS2P2-201ENST00000430745 888 ntBASIC18.87■□□□□ 0.61
TRMT13Q9NUP7 AC055876.3-201ENST00000431496 288 ntBASIC18.87■□□□□ 0.61
TRMT13Q9NUP7 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
TRMT13Q9NUP7 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC18.87■□□□□ 0.61
TRMT13Q9NUP7 TAF8-206ENST00000472818 719 ntTSL 2 BASIC18.87■□□□□ 0.61
TRMT13Q9NUP7 INGX-202ENST00000489074 768 ntBASIC18.87■□□□□ 0.61
TRMT13Q9NUP7 MMP17-203ENST00000535004 719 ntTSL 3 BASIC18.87■□□□□ 0.61
TRMT13Q9NUP7 TSFM-210ENST00000550559 897 ntTSL 5 BASIC18.87■□□□□ 0.61
TRMT13Q9NUP7 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.87■□□□□ 0.61
TRMT13Q9NUP7 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC18.87■□□□□ 0.61
TRMT13Q9NUP7 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC18.87■□□□□ 0.61
TRMT13Q9NUP7 AC090164.3-201ENST00000610780 2143 ntBASIC18.87■□□□□ 0.61
TRMT13Q9NUP7 AC138649.4-201ENST00000612222 287 ntBASIC18.87■□□□□ 0.61
TRMT13Q9NUP7 AL138781.2-201ENST00000617896 1843 ntBASIC18.87■□□□□ 0.61
TRMT13Q9NUP7 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC18.87■□□□□ 0.61
TRMT13Q9NUP7 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.87■□□□□ 0.61
TRMT13Q9NUP7 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRMT13Q9NUP7 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRMT13Q9NUP7 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRMT13Q9NUP7 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
TRMT13Q9NUP7 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
TRMT13Q9NUP7 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRMT13Q9NUP7 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRMT13Q9NUP7 TNXA-203ENST00000507684 2038 ntBASIC18.86■□□□□ 0.61
TRMT13Q9NUP7 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRMT13Q9NUP7 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRMT13Q9NUP7 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
TRMT13Q9NUP7 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRMT13Q9NUP7 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC18.86■□□□□ 0.61
TRMT13Q9NUP7 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRMT13Q9NUP7 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
TRMT13Q9NUP7 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRMT13Q9NUP7 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRMT13Q9NUP7 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRMT13Q9NUP7 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC18.86■□□□□ 0.61
TRMT13Q9NUP7 THTPA-204ENST00000554970 569 ntTSL 4 BASIC18.86■□□□□ 0.61
TRMT13Q9NUP7 THTPA-206ENST00000556015 535 ntTSL 3 BASIC18.86■□□□□ 0.61
TRMT13Q9NUP7 RARRES2P8-201ENST00000566335 367 ntBASIC18.86■□□□□ 0.61
TRMT13Q9NUP7 PRR29-209ENST00000582540 967 ntTSL 2 BASIC18.86■□□□□ 0.61
TRMT13Q9NUP7 MIR4515-201ENST00000584082 81 ntBASIC18.86■□□□□ 0.61
TRMT13Q9NUP7 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC18.86■□□□□ 0.61
TRMT13Q9NUP7 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRMT13Q9NUP7 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRMT13Q9NUP7 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRMT13Q9NUP7 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
TRMT13Q9NUP7 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRMT13Q9NUP7 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRMT13Q9NUP7 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRMT13Q9NUP7 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRMT13Q9NUP7 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.86■□□□□ 0.61
TRMT13Q9NUP7 AC138028.4-201ENST00000564984 1845 ntBASIC18.86■□□□□ 0.61
TRMT13Q9NUP7 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRMT13Q9NUP7 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.86■□□□□ 0.61
TRMT13Q9NUP7 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRMT13Q9NUP7 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.85■□□□□ 0.61
TRMT13Q9NUP7 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.85■□□□□ 0.61
TRMT13Q9NUP7 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.85■□□□□ 0.61
TRMT13Q9NUP7 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRMT13Q9NUP7 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
TRMT13Q9NUP7 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRMT13Q9NUP7 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRMT13Q9NUP7 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRMT13Q9NUP7 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRMT13Q9NUP7 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRMT13Q9NUP7 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
TRMT13Q9NUP7 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRMT13Q9NUP7 TUBB3P1-201ENST00000405796 1332 ntBASIC18.85■□□□□ 0.61
TRMT13Q9NUP7 BSG-215ENST00000618006 1329 ntTSL 2 BASIC18.85■□□□□ 0.61
TRMT13Q9NUP7 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRMT13Q9NUP7 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRMT13Q9NUP7 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC18.85■□□□□ 0.61
TRMT13Q9NUP7 MIR943-201ENST00000401286 94 ntBASIC18.85■□□□□ 0.61
TRMT13Q9NUP7 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC18.85■□□□□ 0.61
TRMT13Q9NUP7 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms