Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
AP3S2P59780 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
AP3S2P59780 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
AP3S2P59780 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
AP3S2P59780 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
AP3S2P59780 RNF216P1-203ENST00000404404 2427 ntBASIC14.95□□□□□ -0.02
AP3S2P59780 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
AP3S2P59780 AL365209.1-201ENST00000624418 6473 ntBASIC14.95□□□□□ -0.02
AP3S2P59780 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
AP3S2P59780 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
AP3S2P59780 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
AP3S2P59780 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
AP3S2P59780 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.95□□□□□ -0.02
AP3S2P59780 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
AP3S2P59780 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
AP3S2P59780 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
AP3S2P59780 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
AP3S2P59780 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
AP3S2P59780 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
AP3S2P59780 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
AP3S2P59780 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
AP3S2P59780 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.94□□□□□ -0.02
AP3S2P59780 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
AP3S2P59780 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP3S2P59780 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.94□□□□□ -0.02
AP3S2P59780 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.94□□□□□ -0.02
AP3S2P59780 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP3S2P59780 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.94□□□□□ -0.02
AP3S2P59780 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP3S2P59780 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
AP3S2P59780 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP3S2P59780 LINC00167-201ENST00000530583 1419 ntBASIC14.94□□□□□ -0.02
AP3S2P59780 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP3S2P59780 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.94□□□□□ -0.02
AP3S2P59780 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP3S2P59780 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP3S2P59780 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
AP3S2P59780 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP3S2P59780 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
AP3S2P59780 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP3S2P59780 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP3S2P59780 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP3S2P59780 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP3S2P59780 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
AP3S2P59780 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
AP3S2P59780 AC005104.2-201ENST00000427818 678 ntBASIC14.94□□□□□ -0.02
AP3S2P59780 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC14.94□□□□□ -0.02
AP3S2P59780 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC14.94□□□□□ -0.02
AP3S2P59780 AL023875.1-201ENST00000640777 796 ntBASIC14.94□□□□□ -0.02
AP3S2P59780 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
AP3S2P59780 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP3S2P59780 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
AP3S2P59780 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP3S2P59780 AC096733.2-201ENST00000609937 1394 ntBASIC14.94□□□□□ -0.02
AP3S2P59780 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
AP3S2P59780 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP3S2P59780 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.94□□□□□ -0.02
AP3S2P59780 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC14.94□□□□□ -0.02
AP3S2P59780 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC14.94□□□□□ -0.02
AP3S2P59780 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP3S2P59780 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
AP3S2P59780 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP3S2P59780 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
AP3S2P59780 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.93□□□□□ -0.02
AP3S2P59780 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP3S2P59780 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP3S2P59780 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP3S2P59780 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP3S2P59780 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
AP3S2P59780 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.93□□□□□ -0.02
AP3S2P59780 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.93□□□□□ -0.02
AP3S2P59780 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC14.93□□□□□ -0.02
AP3S2P59780 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
AP3S2P59780 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
AP3S2P59780 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP3S2P59780 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
AP3S2P59780 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP3S2P59780 AC093525.9-201ENST00000624961 1746 ntBASIC14.93□□□□□ -0.02
AP3S2P59780 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP3S2P59780 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP3S2P59780 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC14.93□□□□□ -0.02
AP3S2P59780 GUSBP6-202ENST00000438529 1198 ntBASIC14.93□□□□□ -0.02
AP3S2P59780 B3GAT3P1-201ENST00000471720 806 ntBASIC14.93□□□□□ -0.02
AP3S2P59780 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC14.93□□□□□ -0.02
AP3S2P59780 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
AP3S2P59780 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC14.93□□□□□ -0.02
AP3S2P59780 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC14.93□□□□□ -0.02
AP3S2P59780 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC14.93□□□□□ -0.02
AP3S2P59780 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
AP3S2P59780 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
AP3S2P59780 CR392000.1-201ENST00000624770 1228 ntBASIC14.93□□□□□ -0.02
AP3S2P59780 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP3S2P59780 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.93□□□□□ -0.02
AP3S2P59780 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC14.93□□□□□ -0.02
AP3S2P59780 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP3S2P59780 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.93□□□□□ -0.02
AP3S2P59780 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP3S2P59780 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
AP3S2P59780 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP3S2P59780 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms