Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.54■□□□□ 0.08
CDRT1O95170 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDRT1O95170 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDRT1O95170 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDRT1O95170 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.54■□□□□ 0.08
CDRT1O95170 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDRT1O95170 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDRT1O95170 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CDRT1O95170 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CDRT1O95170 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDRT1O95170 AL513523.2-202ENST00000427283 2040 ntBASIC15.53■□□□□ 0.08
CDRT1O95170 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDRT1O95170 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDRT1O95170 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDRT1O95170 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDRT1O95170 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDRT1O95170 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDRT1O95170 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDRT1O95170 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.53■□□□□ 0.08
CDRT1O95170 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDRT1O95170 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDRT1O95170 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC15.53■□□□□ 0.08
CDRT1O95170 MDFI-202ENST00000373050 809 ntTSL 2 BASIC15.53■□□□□ 0.08
CDRT1O95170 SLC25A1P2-201ENST00000430693 912 ntBASIC15.53■□□□□ 0.08
CDRT1O95170 DDX43P3-201ENST00000441064 443 ntBASIC15.53■□□□□ 0.08
CDRT1O95170 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC15.53■□□□□ 0.08
CDRT1O95170 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CDRT1O95170 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CDRT1O95170 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CDRT1O95170 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDRT1O95170 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDRT1O95170 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
CDRT1O95170 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.53■□□□□ 0.08
CDRT1O95170 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDRT1O95170 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.53■□□□□ 0.08
CDRT1O95170 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDRT1O95170 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDRT1O95170 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDRT1O95170 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
CDRT1O95170 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDRT1O95170 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDRT1O95170 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDRT1O95170 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDRT1O95170 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDRT1O95170 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDRT1O95170 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC15.53■□□□□ 0.08
CDRT1O95170 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDRT1O95170 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDRT1O95170 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CDRT1O95170 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDRT1O95170 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CDRT1O95170 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDRT1O95170 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDRT1O95170 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDRT1O95170 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDRT1O95170 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDRT1O95170 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
CDRT1O95170 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDRT1O95170 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDRT1O95170 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDRT1O95170 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDRT1O95170 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDRT1O95170 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
CDRT1O95170 AC022188.1-201ENST00000620960 1664 ntBASIC15.52■□□□□ 0.08
CDRT1O95170 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDRT1O95170 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.52■□□□□ 0.08
CDRT1O95170 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDRT1O95170 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.52■□□□□ 0.08
CDRT1O95170 UNC93B2-201ENST00000285383 730 ntBASIC15.52■□□□□ 0.08
CDRT1O95170 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CDRT1O95170 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
CDRT1O95170 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
CDRT1O95170 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
CDRT1O95170 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC15.52■□□□□ 0.08
CDRT1O95170 RBM17P1-201ENST00000453646 1190 ntBASIC15.52■□□□□ 0.08
CDRT1O95170 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC15.52■□□□□ 0.08
CDRT1O95170 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CDRT1O95170 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC15.52■□□□□ 0.08
CDRT1O95170 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC15.52■□□□□ 0.08
CDRT1O95170 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC15.52■□□□□ 0.08
CDRT1O95170 WWOX-216ENST00000569818 525 ntBASIC15.52■□□□□ 0.08
CDRT1O95170 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
CDRT1O95170 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC15.52■□□□□ 0.08
CDRT1O95170 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC15.52■□□□□ 0.08
CDRT1O95170 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.52■□□□□ 0.07
CDRT1O95170 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDRT1O95170 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CDRT1O95170 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CDRT1O95170 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDRT1O95170 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDRT1O95170 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
CDRT1O95170 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CDRT1O95170 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDRT1O95170 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.52■□□□□ 0.07
CDRT1O95170 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDRT1O95170 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDRT1O95170 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDRT1O95170 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC15.51■□□□□ 0.07
CDRT1O95170 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDRT1O95170 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms