Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PGBD3Q8N328 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
PGBD3Q8N328 MCCD1P2-201ENST00000423228 335 ntBASIC17.65■□□□□ 0.42
PGBD3Q8N328 HMGN1P19-201ENST00000436976 333 ntBASIC17.65■□□□□ 0.42
PGBD3Q8N328 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.65■□□□□ 0.42
PGBD3Q8N328 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.65■□□□□ 0.42
PGBD3Q8N328 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.65■□□□□ 0.42
PGBD3Q8N328 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.65■□□□□ 0.42
PGBD3Q8N328 STK19B-204ENST00000512515 211 ntBASIC17.65■□□□□ 0.42
PGBD3Q8N328 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.65■□□□□ 0.42
PGBD3Q8N328 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.65■□□□□ 0.42
PGBD3Q8N328 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.65■□□□□ 0.42
PGBD3Q8N328 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
PGBD3Q8N328 AC004790.2-201ENST00000623588 572 ntBASIC17.65■□□□□ 0.42
PGBD3Q8N328 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PGBD3Q8N328 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PGBD3Q8N328 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PGBD3Q8N328 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PGBD3Q8N328 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
PGBD3Q8N328 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PGBD3Q8N328 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
PGBD3Q8N328 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PGBD3Q8N328 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PGBD3Q8N328 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PGBD3Q8N328 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PGBD3Q8N328 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PGBD3Q8N328 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PGBD3Q8N328 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.64■□□□□ 0.42
PGBD3Q8N328 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
PGBD3Q8N328 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
PGBD3Q8N328 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
PGBD3Q8N328 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.64■□□□□ 0.41
PGBD3Q8N328 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.64■□□□□ 0.41
PGBD3Q8N328 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.64■□□□□ 0.41
PGBD3Q8N328 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.64■□□□□ 0.41
PGBD3Q8N328 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PGBD3Q8N328 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
PGBD3Q8N328 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
PGBD3Q8N328 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
PGBD3Q8N328 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PGBD3Q8N328 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.64■□□□□ 0.41
PGBD3Q8N328 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.64■□□□□ 0.41
PGBD3Q8N328 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PGBD3Q8N328 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PGBD3Q8N328 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
PGBD3Q8N328 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PGBD3Q8N328 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17.64■□□□□ 0.41
PGBD3Q8N328 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
PGBD3Q8N328 VN2R19P-201ENST00000442399 1052 ntBASIC17.64■□□□□ 0.41
PGBD3Q8N328 IGHV3-52-201ENST00000519770 353 ntBASIC17.64■□□□□ 0.41
PGBD3Q8N328 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.64■□□□□ 0.41
PGBD3Q8N328 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.64■□□□□ 0.41
PGBD3Q8N328 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PGBD3Q8N328 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
PGBD3Q8N328 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.64■□□□□ 0.41
PGBD3Q8N328 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
PGBD3Q8N328 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.64■□□□□ 0.41
PGBD3Q8N328 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.64■□□□□ 0.41
PGBD3Q8N328 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PGBD3Q8N328 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
PGBD3Q8N328 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PGBD3Q8N328 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.64■□□□□ 0.41
PGBD3Q8N328 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.64■□□□□ 0.41
PGBD3Q8N328 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PGBD3Q8N328 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
PGBD3Q8N328 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PGBD3Q8N328 AC020916.1-201ENST00000587762 1774 ntBASIC17.63■□□□□ 0.41
PGBD3Q8N328 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.63■□□□□ 0.41
PGBD3Q8N328 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PGBD3Q8N328 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PGBD3Q8N328 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.63■□□□□ 0.41
PGBD3Q8N328 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PGBD3Q8N328 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PGBD3Q8N328 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PGBD3Q8N328 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PGBD3Q8N328 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.63■□□□□ 0.41
PGBD3Q8N328 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.63■□□□□ 0.41
PGBD3Q8N328 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.63■□□□□ 0.41
PGBD3Q8N328 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
PGBD3Q8N328 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PGBD3Q8N328 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
PGBD3Q8N328 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
PGBD3Q8N328 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PGBD3Q8N328 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PGBD3Q8N328 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PGBD3Q8N328 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PGBD3Q8N328 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.63■□□□□ 0.41
PGBD3Q8N328 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.63■□□□□ 0.41
PGBD3Q8N328 MIR4469-201ENST00000583919 79 ntBASIC17.63■□□□□ 0.41
PGBD3Q8N328 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.63■□□□□ 0.41
PGBD3Q8N328 AC092865.6-201ENST00000642101 219 ntBASIC17.63■□□□□ 0.41
PGBD3Q8N328 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
PGBD3Q8N328 AC018470.1-201ENST00000624790 3129 ntBASIC17.63■□□□□ 0.41
PGBD3Q8N328 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PGBD3Q8N328 KRT18P28-201ENST00000453838 1332 ntBASIC17.63■□□□□ 0.41
PGBD3Q8N328 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.63■□□□□ 0.41
PGBD3Q8N328 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PGBD3Q8N328 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.63■□□□□ 0.41
PGBD3Q8N328 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.63■□□□□ 0.41
PGBD3Q8N328 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms